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2025-02-06Refactor: return the relative file to the workspace directory.Alexander_Kabui
2025-02-06Minor fix.Alexander_Kabui
2025-02-06Refactor workspace directory creation to use pathlib's mkdir method.Alexander_Kabui
2025-02-06refactor: Minor cleanup.Alexander_Kabui
2025-02-06refactor: Refactor run_process function.Alexander_Kabui
2025-02-06refactor: Add file_path to output only if it is created.Alexander_Kabui
2025-02-06refactor: Check if data before attempting write operation.Alexander_Kabui
2025-02-06refactor: return code for Calledprocesserror response.Alexander_Kabui
2025-02-06refactor: Refactor compute endpoint for rqtl2.Alexander_Kabui
2025-02-06feat: Add module docstring for rqtl2 computations.Alexander_Kabui
2025-02-06refactor: remove unused imports.Alexander_Kabui
2025-02-06feat: Add function to write input data to a json file.Alexander_Kabui
2025-02-06feat: Add function to prepare files and workspace directory for computation.Alexander_Kabui
2025-02-06feat: Add utility function to create a file if it does not exist.Alexander_Kabui
2025-02-06feat: Add function to compose an rqtl2 run command.Alexander_Kabui
2025-02-06feat: Add function to validate list of keys in object.Alexander_Kabui
2025-02-06feat: Add function to generate rqtl2 data files.Alexander_Kabui
2025-02-06feat: Add method to write list of data to csv file.Alexander_Kabui
2025-02-06feat: Add computational module for rqtl2.Alexander_Kabui
2025-01-27Type ignore gn_libs imports.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-27Ignore pylint error for un-used import.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-27Delete unused imports.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-26Use gn-libs' `database_connection` function.Frederick Muriuki Muriithi
2025-01-21Enable new inserts of new wiki entries.Munyoki Kilyungi
* gn3/api/metadata_api/wiki.py: Import Optional (edit_wiki): Add "/edit" route. Add new comment id. * gn3/db/wiki.py (get_next_comment_id): New function for fetching the getting the next comment_id. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-13mypy fixes.Alexander_Kabui
2025-01-13refactor: Returns markers and pseudomarkers as names in pairscan results.Alexander_Kabui
2025-01-09Typo fixes.Alexander_Kabui
2025-01-09Minor typo fix.Alexander_Kabui
2025-01-09Minor fix.Alexander_Kabui
2025-01-09refactor: raise and Handle error a app level.Alexander_Kabui
2025-01-09feat: Add a decorator function to enable streaming functinality.Alexander_Kabui
2025-01-09fix: pylint fix.Alexander_Kabui
2025-01-09refactor: remove obsolete streaming endpoint.Alexander_Kabui
2025-01-09refactor: enhance docstring for streaming endpoint.Alexander_Kabui
2025-01-09feat: Add and register streaming blueprint.Alexander_Kabui
2025-01-09feat: Add streaming main endpoint.Alexander_Kabui
2025-01-09feat: Init add module for streaming api endpoins.Alexander_Kabui
2025-01-09refactor: import streaming functionality from module.Alexander_Kabui
2025-01-09feat: Add function to run an external process and capture result in a file.Alexander_Kabui
2025-01-09feat: Init add streaming module for genenetwork3.Alexander_Kabui
2025-01-08refactor: Modify error message for run_process function.Alexander_Kabui
2025-01-08refactor: Return results as dict with correct metadata for subprocess.Alexander_Kabui
2025-01-08refactor: Pass arg commands to subprocess as a list.Alexander_Kabui
* Use with open context for subprocess. * Correctly handle subprocess error.
2025-01-07feat: Revert commit 688d6a4.Alexander_Kabui
2025-01-07feat: remove shell True to for debug.Alexander_Kabui
2024-12-20Add todo note for writing rqtl file.Alexander_Kabui
2024-12-20fix: Pylint fixes.Alexander_Kabui
2024-12-20feat: Enable streaming for output.Alexander_Kabui
2024-12-17feat: Init integrate streaming functionality to rqtl1.Alexander_Kabui
2024-12-13fix: Fix unused variables pylint.Alexander_Kabui
generated by cgit-pink 1.4.1 (git 2.36.1) at 2025-11-22 19:32:02 +0000