genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2021-08-09	Fix linting errors	Muriithi Frederick Muriuki
2021-08-08	Only load extra data if the traits have basic info	Muriithi Frederick Muriuki
2021-08-08	Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...	Muriithi Frederick Muriuki
2021-08-07	Add gunicorn support for production	Pjotr Prins
2021-08-05	db: traits: Return unique values when fetching sample data	BonfaceKilz
2021-08-05	Reorganise the database code	Muriithi Frederick Muriuki
2021-08-05	Build up trait_name items from full name	Muriithi Frederick Muriuki
2021-08-04	Fix issues caught by pylint	Muriithi Frederick Muriuki
2021-08-04	Retrieve the RISet and RISet ID values	Muriithi Frederick Muriuki
2021-08-04	Add tests for post-processing functions	Muriithi Frederick Muriuki
2021-08-04	Avoid string interpolation: use prepared statement	Muriithi Frederick Muriuki
2021-07-30	Rework db functions to enable postprocessing	Muriithi Frederick Muriuki
2021-07-30	Add module for common utilities	Muriithi Frederick Muriuki
2021-07-30	Return dict from query functions	Muriithi Frederick Muriuki
2021-07-29	Merge branch 'main' into Feature/Update-db-from-csv-data	BonfaceKilz
2021-07-29	Delete "update_raw" and it's test-cases	BonfaceKilz
2021-07-29	Add method for updating values from a sample dataset	BonfaceKilz
2021-07-29	Add partial type annotations for slink module	Muriithi Frederick Muriuki
2021-07-29	Add type annotations to the function	Muriithi Frederick Muriuki
2021-07-29	Retrieve trait information	Muriithi Frederick Muriuki
2021-07-29	Make name retrieval more general	Muriithi Frederick Muriuki
2021-07-29	Retrieve 'ProbeSet' trait name	Muriithi Frederick Muriuki
2021-07-29	db: traits: Remove publishdata column	BonfaceKilz
2021-07-26	gn3: db: Create a raw update query	BonfaceKilz
2021-07-26	db: traits: Fetch sample_data from a trait in csv form	BonfaceKilz
2021-07-26	Merge branch 'main' of github.com:genenetwork/genenetwork3	Muriithi Frederick Muriuki
2021-07-26	Fix issues caught by pylint	Muriithi Frederick Muriuki
2021-07-26	db: traits: Remove unused functions	BonfaceKilz
2021-07-26	Check if corr_coefficient is NaN, since apparently it's stored as NaN instead...	zsloan
2021-07-23	Add data examples for `slink`. Implement function.	Muriithi Frederick Muriuki
2021-07-23	Iterate through all valid pairs	Muriithi Frederick Muriuki
2021-07-23	Extract function to flatten list of lists	Muriithi Frederick Muriuki
2021-07-23	Fix issue caught in `nearest` while testing `slink`	Muriithi Frederick Muriuki
2021-07-23	New function (`slink`): return [] on exception	Muriithi Frederick Muriuki
2021-07-23	Add dummy module documentation	Muriithi Frederick Muriuki
2021-07-23	Add docstring for `nearest' function	Muriithi Frederick Muriuki
2021-07-22	Get shortest distance from two lists/tuples of member coordinates	Muriithi Frederick Muriuki
2021-07-22	Extract common `is_list_or_tuple' function	Muriithi Frederick Muriuki
2021-07-22	Test for shortest distance between members in a list and coordinate	Muriithi Frederick Muriuki
2021-07-22	Check that given list and both coordinates, we get shortest distance	Muriithi Frederick Muriuki
2021-07-22	Check that all distances are positive or zero	Muriithi Frederick Muriuki
2021-07-22	Check that distance from A to B is same as from B to A	Muriithi Frederick Muriuki
2021-07-22	Check that child distance from itself is zero	Muriithi Frederick Muriuki
2021-07-22	Check the child lengths are same as length of parent	Muriithi Frederick Muriuki
2021-07-22	Add docstring	Muriithi Frederick Muriuki
2021-07-22	Check that list and its direct children are not empty	Muriithi Frederick Muriuki
2021-07-22	Implement check for lists or tuples	Muriithi Frederick Muriuki
2021-07-21	Extract tests from code in GN1	Muriithi Frederick Muriuki
2021-07-20	Implement the correlation function	Muriithi Frederick Muriuki
2021-07-20	Add test for code to move over from GN1	Muriithi Frederick Muriuki