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path: root/gn3/db/traits.py
AgeCommit message (Expand)Author
2022-02-08db: traits: Allow insertions of "0" in resp. sample values tablesBonfaceKilz
2022-02-08db: traits: Insert "count" instead of "error" in "NStrain" tableBonfaceKilz
2022-02-03db: Fetch correct sample dataBonfaceKilz
2022-02-02Remove PublishFreeze from retrieve_publish_trait_info queryzsloan
2022-02-02Fix bug where sample values of 0 were being treated as Falsezsloan
2022-02-02Fix retrieve_publish_trait_data queryzsloan
2022-01-12Indent code correctlyFrederick Muriuki Muriithi
2022-01-12Deduplicate query to fetch data for 'Publish' traitsFrederick Muriuki Muriithi
2022-01-04traits.py: Don't use "value" to check if a record existsBonfaceKilz
2022-01-04traits.py: Return early during an insert if the give record existsBonfaceKilz
2022-01-04traits.py Delete a record only if it existsBonfaceKilz
2021-12-14linting: Fix obvious linting issuesFrederick Muriuki Muriithi
2021-12-09Provide clearer error messageFrederick Muriuki Muriithi
2021-11-29Merge branch 'main' into partial-correlationsMuriithi Frederick Muriuki
2021-11-29Fix linting errorsFrederick Muriuki Muriithi
2021-11-29db: traits: Support additions and deletions from csv fileBonfaceKilz
2021-11-29db: traits: Remove trailing ".0" in int valuesBonfaceKilz
2021-11-29db: traits: Remove "\n\n" when generating csv fileBonfaceKilz
2021-11-25db: traits: Support additions and deletions from csv fileBonfaceKilz
2021-11-24db: traits: Remove trailing ".0" in int valuesBonfaceKilz
2021-11-23db: traits: Remove "\n\n" when generating csv fileBonfaceKilz
2021-10-19Move `export_informative` function to `gn3.db.traits` moduleFrederick Muriuki Muriithi
2021-10-19Move 'export_trait_data' to 'gn3.db.traits' moduleFrederick Muriuki Muriithi
2021-09-27Update terminology: `riset` to `group`Frederick Muriuki Muriithi
2021-09-27Update terminology: `strain` to `sample`Frederick Muriuki Muriithi
2021-09-22Fix typing issuesFrederick Muriuki Muriithi
2021-09-22Fix pylint errorsFrederick Muriuki Muriithi
2021-08-31Fix linting errors, minor bugs and reorganise codeMuriithi Frederick Muriuki
2021-08-31Update `heatmap_data` function: remove extraneous dataMuriithi Frederick Muriuki
2021-08-17Provide top-level `riset` key-value pairMuriithi Frederick Muriuki
2021-08-09Set up the trait dataset type correctlyMuriithi Frederick Muriuki
2021-08-09Retrieve the trait dataMuriithi Frederick Muriuki
2021-08-09Add missing arguments. Fix typo.Muriithi Frederick Muriuki
2021-08-09Fix linting errorsMuriithi Frederick Muriuki
2021-08-08Only load extra data if the traits have basic infoMuriithi Frederick Muriuki
2021-08-08Merge branch 'main' of github.com:genenetwork/genenetwork3 into heatmap_decom...Muriithi Frederick Muriuki
2021-08-05db: traits: Return unique values when fetching sample dataBonfaceKilz
2021-08-05Reorganise the database codeMuriithi Frederick Muriuki
2021-08-05Build up trait_name items from full nameMuriithi Frederick Muriuki
2021-08-04Fix issues caught by pylintMuriithi Frederick Muriuki
2021-08-04Retrieve the RISet and RISet ID valuesMuriithi Frederick Muriuki
2021-08-04Add tests for post-processing functionsMuriithi Frederick Muriuki
2021-08-04Avoid string interpolation: use prepared statementMuriithi Frederick Muriuki
2021-07-30Rework db functions to enable postprocessingMuriithi Frederick Muriuki
2021-07-30Return dict from query functionsMuriithi Frederick Muriuki
2021-07-29Merge branch 'main' into Feature/Update-db-from-csv-dataBonfaceKilz
2021-07-29Add method for updating values from a sample datasetBonfaceKilz
2021-07-29Add type annotations to the functionMuriithi Frederick Muriuki
2021-07-29Retrieve trait informationMuriithi Frederick Muriuki
2021-07-29Make name retrieval more generalMuriithi Frederick Muriuki
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