index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
about
summary
refs
log
tree
commit
diff
log msg
author
committer
range
path:
root
/
gn3
/
db
/
rdf.py
Age
Commit message (
Expand
)
Author
2024-08-29
Add "created" to wiki return.
Munyoki Kilyungi
2024-08-26
Fix pylint errors.
Munyoki Kilyungi
2024-08-26
If there's no data, return a 404.
Munyoki Kilyungi
2024-08-26
Replace map with list comprehension.
Munyoki Kilyungi
2024-08-26
Fetch all the wiki entries by symbol.
Munyoki Kilyungi
2024-08-26
Move constants to their own file.
Munyoki Kilyungi
2023-10-27
Fix pylint error.
Munyoki Kilyungi
2023-10-27
Add functions that wrap around the common jsonld patterns.
Munyoki Kilyungi
2023-10-27
Break up long line.
Munyoki Kilyungi
2023-10-27
Ignore construct result for mypy compliance
Munyoki Kilyungi
2023-10-27
Abstract out (sparql) CONSTRUCT into a function.
Munyoki Kilyungi
2023-10-27
Delete gn3.db.rdf.sparql_query.
Munyoki Kilyungi
2023-10-27
Delete db.rdf.get_url_local_name.
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/phenotypes/:name".
Munyoki Kilyungi
2023-10-27
Delete get_dataset_metadata.
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/publications/:name".
Munyoki Kilyungi
2023-10-27
Add fabio: and prism: to PREFIXES.
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/datasets/:name".
Munyoki Kilyungi
2023-10-27
Add missing dcat: prefix.
Munyoki Kilyungi
2023-10-27
Derive RDF_PREFIXES string from PREFIXES.
Munyoki Kilyungi
2023-10-27
Remove get_url_local_name when processing result keys.
Munyoki Kilyungi
2023-10-27
Simplify CONSTRUCT query when fetching a dataset's metadata.
Munyoki Kilyungi
2023-10-27
Update RDF prefixes.
Munyoki Kilyungi
2023-06-15
Fetch genotypes from virtuoso
Munyoki Kilyungi
2023-06-12
Delete unused import
Munyoki Kilyungi
2023-06-12
Fetch phenotypes from virtuoso
Munyoki Kilyungi
2023-06-12
Delete unused get_trait_metadata function
Munyoki Kilyungi
2023-06-07
Add publication end-point
Munyoki Kilyungi
2023-06-07
Nest duplicate entries into a list from a sparql result
Munyoki Kilyungi
2023-06-06
Pass geoSeries as a URL
Munyoki Kilyungi
2023-06-06
Rename gn:geoPlatform -> gn:geoPlatformUrl
Munyoki Kilyungi
2023-06-06
Match how dataset metadata is fetched with GN1
Munyoki Kilyungi
2023-06-06
Replace taxon prefix with ncbiTaxon which references NCBI
Munyoki Kilyungi
2023-06-02
Replace SELECT with CONSTRUCT when fetching a dataset's metadata
Munyoki Kilyungi
2023-06-02
Create a function for stripping the last bit from a URL
Munyoki Kilyungi
2023-04-17
Create new endpoint for fetching GeneRIF entries
Munyoki Kilyungi
2023-03-01
Fetch trait metadata from RDF
Munyoki Kilyungi
2022-12-08
Remove unused import
Frederick Muriuki Muriithi
2022-12-06
Use a dataset's name to fetch it's metadata from RDF
Munyoki Kilyungi
2022-11-16
Inject SPARQLWrapper as a parameter
Munyoki Kilyungi
2022-11-02
Re-implement RDF related code to use monads in its own module
Munyoki Kilyungi