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path: root/gn3/db/phenotypes.py
AgeCommit message (Expand)Author
2023-09-21Fix query in update_cross_referencezsloan
2023-08-17Fix fetch_trait query for phenotypeszsloan
2023-08-04Remove the ORM-dependent `update` function.Frederick Muriuki Muriithi
2023-07-21Update a Publication in the database.Frederick Muriuki Muriithi
2023-07-21Fetch a publication by its PubMed IDFrederick Muriuki Muriithi
2023-07-21Rename function: fetch_publication ==> fetch_publication_by_idFrederick Muriuki Muriithi
2023-07-19Extract code dealing with ProbeSets to their own module.Frederick Muriuki Muriithi
2023-07-19Extract reusable code to separate moduleFrederick Muriuki Muriithi
2023-07-18Bug: Change from `_id` to `id_` to avoid downstream breakage.Frederick Muriuki Muriithi
2023-07-18Fix wrong import, and typing issues.Frederick Muriuki Muriithi
2023-07-18Fetch a single publication by `PublicationId`Frederick Muriuki Muriithi
2023-07-18Fetch metadata for a single phenotype.Frederick Muriuki Muriithi
2023-07-18Fetch single phenotype trait by `dataset_id` and `trait_name`.Frederick Muriuki Muriithi
2021-07-10Fix pylint issuesBonfaceKilz
2021-07-10db: phenotypes: Add Probeset data structuresBonfaceKilz
2021-05-26Move the methods, "update" and "fetch", to gn3.dbBonfaceKilz
2021-05-26db: phenotypes: Fix publication_mappingBonfaceKilz
2021-05-26db: phenotypes: Fix typoBonfaceKilz
2021-05-20db: phenotypes: Add function for fetching a single resultBonfaceKilz
2021-05-20db: phenotypes: Add a dataclass mapBonfaceKilz
2021-05-20db: phenotypes: Add Publication table mappingBonfaceKilz
2021-05-20db: phenotypes: Rename phenotype_column_mappingBonfaceKilz
2021-05-20db: phenotypes: Add Publication dataclass and mappingBonfaceKilz
2021-05-20db: phenotypes: Generalise the update functionBonfaceKilz
2021-05-20db: phenotypes: Map a table to it's relevant dict mappingBonfaceKilz
2021-05-20db: phenotypes: Add type for DataclassBonfaceKilz
2021-05-20db: phenotypes: Put mapping def after dataclassBonfaceKilz
2021-05-20db: phenotypes: Add phenotype table mappingBonfaceKilz
2021-05-20db: phenotypes: Add dataclass to represent PublishXRefBonfaceKilz
2021-05-20db: phenotype: Make "pylint: disable=[R0902]" global for fileBonfaceKilz
2021-05-20db: phenotypes: Add a way of updating the Phenotype tableBonfaceKilz