Age | Commit message (Expand) | Author |
---|---|---|
2023-09-21 | Fix query in update_cross_reference | zsloan |
2023-08-17 | Fix fetch_trait query for phenotypes | zsloan |
2023-08-04 | Remove the ORM-dependent `update` function. | Frederick Muriuki Muriithi |
2023-07-21 | Update a Publication in the database. | Frederick Muriuki Muriithi |
2023-07-21 | Fetch a publication by its PubMed ID | Frederick Muriuki Muriithi |
2023-07-21 | Rename function: fetch_publication ==> fetch_publication_by_id | Frederick Muriuki Muriithi |
2023-07-19 | Extract code dealing with ProbeSets to their own module. | Frederick Muriuki Muriithi |
2023-07-19 | Extract reusable code to separate module...Extract the reusable function into a separate `query_tools` module for use in other modules. | Frederick Muriuki Muriithi |
2023-07-18 | Bug: Change from `_id` to `id_` to avoid downstream breakage....The downstream code expects `id_` not `_id`. | Frederick Muriuki Muriithi |
2023-07-18 | Fix wrong import, and typing issues. | Frederick Muriuki Muriithi |
2023-07-18 | Fetch a single publication by `PublicationId` | Frederick Muriuki Muriithi |
2023-07-18 | Fetch metadata for a single phenotype. | Frederick Muriuki Muriithi |
2023-07-18 | Fetch single phenotype trait by `dataset_id` and `trait_name`. | Frederick Muriuki Muriithi |
2021-07-10 | Fix pylint issues | BonfaceKilz |
2021-07-10 | db: phenotypes: Add Probeset data structures...* gn3/db/phenotypes.py (Probeset): New dataclass. (probeset_mapping): New dict. * gn3/db/__init__.py: Add probeset_mapping and Probeset. | BonfaceKilz |
2021-05-26 | Move the methods, "update" and "fetch", to gn3.db | BonfaceKilz |
2021-05-26 | db: phenotypes: Fix publication_mapping | BonfaceKilz |
2021-05-26 | db: phenotypes: Fix typo | BonfaceKilz |
2021-05-20 | db: phenotypes: Add function for fetching a single result...* gn3/db/phenotypes.py (fetchone): New function. | BonfaceKilz |
2021-05-20 | db: phenotypes: Add a dataclass map...Maps a string to it's dataclass. | BonfaceKilz |
2021-05-20 | db: phenotypes: Add Publication table mapping | BonfaceKilz |
2021-05-20 | db: phenotypes: Rename phenotype_column_mapping | BonfaceKilz |
2021-05-20 | db: phenotypes: Add Publication dataclass and mapping | BonfaceKilz |
2021-05-20 | db: phenotypes: Generalise the update function...* gn3/db/phenotypes.py (update_phenotype): Delete it. (update): New, more general function. | BonfaceKilz |
2021-05-20 | db: phenotypes: Map a table to it's relevant dict mapping | BonfaceKilz |
2021-05-20 | db: phenotypes: Add type for Dataclass...See: https://www.py4u.net/discuss/188952 | BonfaceKilz |
2021-05-20 | db: phenotypes: Put mapping def after dataclass | BonfaceKilz |
2021-05-20 | db: phenotypes: Add phenotype table mapping | BonfaceKilz |
2021-05-20 | db: phenotypes: Add dataclass to represent PublishXRef | BonfaceKilz |
2021-05-20 | db: phenotype: Make "pylint: disable=[R0902]" global for file | BonfaceKilz |
2021-05-20 | db: phenotypes: Add a way of updating the Phenotype table...* gn3/db/phenotypes.py (Phenotype): New dataclass. (update_phenotype): New function. [phenotype_column_mapping]: New variable. | BonfaceKilz |