Age | Commit message (Expand) | Author |
2023-10-10 | Remove authentication from GN3...Authentication should be handled by the auth server (gn-auth) and thus, this
commit removes code handling user authentication from the GN3 system.
| Frederick Muriuki Muriithi |
2023-05-25 | Script to assign existing data to publicly-visible resources...A script to assign existing data not assigned to any group to publicly-visible
resources.
| Frederick Muriuki Muriithi |
2023-04-27 | auth: List also the non-resource privileges the user has...While creating new group roles, enable the listing of non-resource privileges,
e.g. `system:group:*` and `system:user:*` that the user has to allow for them
to be used in role creation.
| Frederick Muriuki Muriithi |
2023-04-27 | auth: Add authorisation checks for role editting. | Frederick Muriuki Muriithi |
2023-04-25 | auth: Roles: Check for editability...Some roles should not be user-editable, and as such, we need to check before
allowing any edits on such roles. This commit makes that possible.
| Frederick Muriuki Muriithi |
2023-04-21 | auth: Attach linked data to specific resources. | Frederick Muriuki Muriithi |
2023-04-21 | auth: Fetch user group phenotypes not attached to a resource. | Frederick Muriuki Muriithi |
2023-04-17 | Hook up code to use external search script for phenotypes | Frederick Muriuki Muriithi |
2023-04-17 | auth: Delete code that is no longer used | Frederick Muriuki Muriithi |
2023-04-15 | Decouple `gn3.db_utils` from `flask.current_app`....Decouple the `gn3.db_utils` module from the global `flask.current_app` object,
ensuring that the database uri value is passed in as a required argument to
the `gn3.db_utils.database_connection` function.
| Frederick Muriuki Muriithi |
2023-04-12 | auth: Enable listing of unlinked genotype/mRNA group data. | Frederick Muriuki Muriithi |
2023-03-22 | auth: Enable linking multiple datasets to the group at once. | Frederick Muriuki Muriithi |
2023-03-20 | auth: data: Enable offset in queries...Enable the 'OFFSET' clause in the queries to allow for progressive fetching of
data from the database using the 'Previous' and 'Next' buttons.
| Frederick Muriuki Muriithi |
2023-03-20 | auth: data: List Phenotypes at the trait level...For Phenotypes, list the Phenotype traits rather than the dataset(s).
| Frederick Muriuki Muriithi |
2023-03-09 | auth: redis data: migrate data in redis...Implement the code to migrate the data from redis to SQLite.
| Frederick Muriuki Muriithi |
2023-03-07 | auth: group_roles: Enable addition/deletion of privileges | Frederick Muriuki Muriithi |
2023-03-07 | auth: user_by_id: Return a user or raise an exception...Fetching the user by id should return the user, or raise an exception. We get
rid of the Maybe monad here since it is leading to some weird code flows -
probably the wrong monad to use here.
| Frederick Muriuki Muriithi |
2023-03-03 | auth: Enable viewing group role details. | Frederick Muriuki Muriithi |
2023-03-03 | auth: group roles: enable creation and listing of group roles. | Frederick Muriuki Muriithi |
2023-02-24 | auth: resources: Fix query for data not linked to resources | Frederick Muriuki Muriithi |
2023-02-24 | auth: resources: Link data to resources. | Frederick Muriuki Muriithi |
2023-02-09 | auth: Reject request to join a group....* gn3/auth/authorisation/groups/models.py: Modify function to either accept or
reject join requests.
* gn3/auth/authorisation/groups/views.py: Provide endpoint to reject join
requests.
* migrations/auth/20230207_01_r0bkZ-create-group-join-requests-table.py:
Prevent user from applying to join the same group more than once.
| Frederick Muriuki Muriithi |
2023-02-08 | auth: groups: handle join requests. | Frederick Muriuki Muriithi |
2023-02-07 | auth: groups: Enable users to request to join group. | Frederick Muriuki Muriithi |
2023-02-06 | auth: resource: Enable viewing the details of a resource. | Frederick Muriuki Muriithi |
2023-02-02 | auth: Improve authorisation...Retrieve the token, and user in the authorisation decorator to enable checking
of privileges.
| Frederick Muriuki Muriithi |
2023-02-02 | auth: Reorganise modules/packages for easier dev and maintenance...Split the views/routes into separate modules each dealing with a narrower
scope of the application to aid in maintenance, and help with making the
development easier.
| Frederick Muriuki Muriithi |