genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2024-04-30	Replace SQLITE_DB_PATH with LLM_DB_PATH for llm db path.	Alexander_Kabui
2024-04-30	Add docstring to view_history function.	Munyoki Kilyungi
2024-04-30	Use JWT tokens from gn-auth.	Munyoki Kilyungi
2024-04-30	Add an endpoint to query a dataset's git history from it's id.	Munyoki Kilyungi
2024-04-30	Rename retrieve_dataset_metadata to retrieve_metadata.	Munyoki Kilyungi
2024-04-15	Delete unused imports.	Munyoki Kilyungi
2024-03-26	add sqlite-db-path config	Alexander_Kabui
2024-03-26	fetch pubmed file from /gn-meta/lit	Alexander_Kabui
2024-03-25	pep8 formatting	Alexander_Kabui
2024-03-25	save db data on SQLITE_PATH file path	Alexander_Kabui
2024-03-25	fix user_id type	Alexander_Kabui
2024-03-25	enable logigng info for api <rating>	Alexander_Kabui
2024-03-25	match user id to type str	Alexander_Kabui
2024-03-25	fetch tmpdir from current app connfig	Alexander_Kabui
2024-03-25	fix db path issue for lllm	Alexander_Kabui
2024-03-25	use data dir for files	Alexander_Kabui
2024-03-22	dump gnqa rating data to db	Alexander_Kabui
2024-02-15	Use correct names for dataset entries in json result.	Munyoki Kilyungi
2024-02-14	Remove try ... except clauses around RDF endpoints.	Munyoki Kilyungi
2024-02-14	Stem the dataset's id before constructing the path.	Munyoki Kilyungi
2024-02-13	Use correct path for dataset metadata files.	Munyoki Kilyungi
2024-02-13	Update "dataset/<name>" API endpoint to fetch metadata from files.	Munyoki Kilyungi
2024-01-26	centralize common errors	Alexander_Kabui
2024-01-26	Feature/gn llm caching (#148)	Alexander Kabui
2024-01-17	Enhance error response message in API endpoint	Alexander_Kabui
2024-01-17	Refactor llms.process: Rename getGNQA to get_gnqa	Alexander_Kabui
2024-01-16	add api endpoint for rating reference documents (#146)	Alexander Kabui
2024-01-10	Optionally fetch dataset metadata if provided during genotype fetch.	Munyoki Kilyungi
2024-01-10	Switch to gnt:belongsToSpecies in genotype queries.	Munyoki Kilyungi
2024-01-10	Remove hard-coded dataset name.	Munyoki Kilyungi
2024-01-08	Optionally fetch dataset metadata if provided during probeset fetch.	Munyoki Kilyungi
2024-01-06	Remove extra gene metadata from query as it's un-necessary.	Munyoki Kilyungi
2024-01-06	Add extra keys to the Probeset's json-ld context.	Munyoki Kilyungi
2024-01-06	Refactor gene symbol handling and add references to probeset.	Munyoki Kilyungi
2024-01-06	Use gnt:geneSymbol property to fetch genes in Probeset RDF query.	Munyoki Kilyungi
2024-01-03	fix fetch token error from curent app	Alexander_Kabui
2023-12-29	handle exception for request error	Alexander_Kabui
2023-12-22	Feature/gn llms (#140)	Alexander Kabui
2023-12-15	Update RDF ProbeSet query.	Munyoki Kilyungi
2023-12-15	First frame and then compact probeset results.	Munyoki Kilyungi
2023-12-15	Update ProbeSet's context.	Munyoki Kilyungi
2023-12-15	Update BASE_CONTEXT entries.	Munyoki Kilyungi
2023-12-07	Fix typo in GoTree prefix.	Munyoki Kilyungi
2023-12-07	Add optional property for platform info in dataset representation.	Munyoki Kilyungi
2023-12-07	Fetch normalization metadata correctly.	Munyoki Kilyungi
2023-12-07	Fix typo in platform prefix.	Munyoki Kilyungi
2023-12-07	Refactor metadata mappings for improved dataset representation.	Munyoki Kilyungi
2023-12-07	Update phenotype queries to use gnt:belongsToGroup.	Munyoki Kilyungi
2023-11-30	Add a phenotype's chromosome location to the Phenotype fetch.	Munyoki Kilyungi
2023-11-30	Place publication details on a sub-graph of its own.	Munyoki Kilyungi