genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Collapse)	Author
2024-07-08	Pass output directory to R/qtl script instead of pulling it from the	zsloan
	environment Also fixes issue where the control marker keyword was wrong
2022-03-22	Fixes pylint errors	zsloan

2022-03-22	Fix issue that causes R/qtl to always run pair-scan even if pair-scan isn't ↵	zsloan
	selected
2022-03-22	Added genofile name to inputs for processing R/qtl pair-scan results, since ↵	zsloan
	it's needed to store the proximal/distal markers for each position
2022-03-22	Fix imports to import both process_rqtl_mapping and process_rqtl_pairscan in ↵	zsloan
	api/rqtl.py
2022-03-22	Added pairscan boolean kwarg and process_rqtl_pairscan function for reading ↵	zsloan
	in pairscan results + renamed process_rqtl_output to process_rqtl_mapping to distinguish between that and pairscan
2021-09-03	Add covarstruct as a possible keyword for the rqtl_wrapper.R script (not ↵	zsloan
	integrated into the script yet though)
2021-06-18	Fixed pylint issues	zsloan

2021-06-18	Fixed issue where all bool kwargs were always being passed to ↵	zsloan
	generate_rqtl_cmd and also made code check if output file already exists (so caching works)
2021-05-25	Include code that processes rqtl output files and returns actual results ↵	zsloan
	instead of just the output filename
2021-05-18	Account for boolean kwargs in compute() by storing them in a list, since ↵	zsloan
	they don't have corresponding values
2021-05-18	Fixed variety of issues detected by pylint	zsloan

2021-05-17	Read in kwargs fromrequest and pass the command, tmpdir, and kwargs to ↵	zsloan
	generate_rqtl_cmd which returns the actual command and output path
2021-05-17	Add rqtl.py for rqtl endpoints	zsloan