| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-09-05 | Always output the top-level graph when compacting. | Munyoki Kilyungi | |
| This makes sure that the API is always consistent. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-09-05 | Use correct prefix when querying for email in triple. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-09-05 | Create global wiki context usable by all functions in gn3.rdf.wiki | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-09-05 | Ignore type error and add a FIXME stub. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-09-05 | Add missing doc-strings to make pylint pass. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-09-05 | Restructure RDF module. | Munyoki Kilyungi | |
| * gn3/api/metadata.py: Import constants from gn3.db.rdf * gn3/api/metadata_api/wiki.py: Ditto. Import "get_wiki_entries_by_symbol" from gn3.db.rdf.wiki. * gn3/db/constants.py: Delete file and move all constants ... * gn3/db/rdf.py: ... and functions ... * gn3/db/rdf/__init__.py: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-09-05 | Sort previos records by datetime. | Alexander_Kabui | |
| 2024-09-05 | Apply pep8 formatting. | Alexander_Kabui | |
| 2024-09-05 | Create new endpoints for fetching user previous records. | Alexander_Kabui | |
| 2024-09-03 | Make pylint fixes. | Alexander_Kabui | |
| 2024-09-03 | Add tests for fetching and populating references. | Alexander_Kabui | |
| 2024-09-03 | Add unittests for formatting bib info. | Alexander_Kabui | |
| 2024-09-03 | Remove unused imports. | Alexander_Kabui | |
| 2024-09-03 | Use Jsonb for storing results. | Alexander_Kabui | |
| 2024-09-03 | Raise KeyError for doc_id not found in doc_ids. | Alexander_Kabui | |
| 2024-09-02 | Remove redundant function for fetching data with task_id. | Alexander_Kabui | |
| 2024-09-02 | Modify default backoff_factor for adapter. | Alexander_Kabui | |
| 2024-09-02 | Add docs for custom request method. | Alexander_Kabui | |
| 2024-09-02 | Rename task_id to task_object. | Alexander_Kabui | |
| 2024-09-02 | Refactor doc_id object. | Alexander_Kabui | |
| 2024-09-02 | Remove unecessary check for open file. | Alexander_Kabui | |
| 2024-09-02 | Fix minor syntax issue. | Alexander_Kabui | |
| 2024-09-02 | Fix spacing after punctuation. | Alexander_Kabui | |
| 2024-09-02 | Use default datetime for table. | Alexander_Kabui | |
| 2024-09-02 | Add spacing after punctuation. | Alexander_Kabui | |
| 2024-08-30 | Fix merge conflict. | Alexander_Kabui | |
| 2024-08-30 | Merge pull request #165 from genenetwork/feature/gnqa-search | Alexander Kabui | |
| Feature/gnqa search | |||
| 2024-08-29 | chore: pylint docstring | John Nduli | |
| 2024-08-29 | docs: add function comments | John Nduli | |
| 2024-08-29 | feat: add api calls to get categories and last comment | John Nduli | |
| 2024-08-29 | Add sql file for creating llm db tables. | Alexander_Kabui | |
| 2024-08-29 | Add default timestamp and and primary key for Rating table. | Alexander_Kabui | |
| 2024-08-29 | Fix minor typo. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Remove "@id" re-map in the json-ld base context. | Munyoki Kilyungi | |
| * gn3/db/constants.py [BASE_CONTEXT]: Remove "id" key. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Fetch the latest comment by the versionId. | Munyoki Kilyungi | |
| * gn3/db/rdf.py (get_wiki_entries_by_symbol): Update query to fetch the latest query by the version. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Make fetching wiki entries by symbol case insensitive. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Add "created" to wiki return. | Munyoki Kilyungi | |
| * gn3/db/rdf.py (get_wiki_entries_by_symbol): Add "created" to dictionary. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Update doc-string for "handle_sparql_errors". | Munyoki Kilyungi | |
| * gn3/errors.py (handle_sparql_errors): Correct the doc-string. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Return the correct status error code for url errors. | Munyoki Kilyungi | |
| * gn3/errors.py (url_server_error): Return a 500 http status code for URL server errors. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-29 | Add logging for gn llm errors. | Alexander_Kabui | |
| 2024-08-29 | Check for empty values when fetching search history. | Alexander_Kabui | |
| 2024-08-29 | Use correct http method `Delete` for search history. | Alexander_Kabui | |
| 2024-08-29 | Update gnqa search endpoint from POST to PUT. | Alexander_Kabui | |
| 2024-08-26 | Fix mypy errors. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-26 | Move "GET /wiki/<symbol>" end-point to gn3.api.metadata.wiki. | Munyoki Kilyungi | |
| * gn3/api/metadata.py (get_wiki_entries): Move this... * gn3/api/metadata_api/wiki.py (edit_wiki): ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-26 | Auto-pep8 buffer and ignore type check for payload. | Munyoki Kilyungi | |
| * gn3/api/metadata_api/wiki.py (edit_wiki): Ignore type-check for payload. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-26 | Fix pylint errors. | Munyoki Kilyungi | |
| * gn3/api/metadata.py: Remove duplicate imports. * gn3/db/constants.py: Add docstring. * gn3/db/rdf.py (get_wiki_entries_by_symbol): Remove duplicate dictionary key. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-26 | Fix handling of sparql errors. | Munyoki Kilyungi | |
| * gn3/errors.py (handle_sparql_errors): Use the exception's class name to fetch the status code. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-26 | If there's no data, return a 404. | Munyoki Kilyungi | |
| * gn3/api/metadata.py (get_wiki_entries): Return an empty {} when there's no data. * gn3/db/rdf.py (query_frame_and_compact): Delete check for empty results. Instead just return the context as is. (query_and_compact): Ditto. (query_and_frame): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-08-26 | Set correct content-header & status code for ld+json/json response. | Munyoki Kilyungi | |
| * gn3/api/metadata.py: Import jsonify, make_response. (get_wiki_entries): Set a 404 status code when a response is empty. Set correct Content-Type header for ld+json. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
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index : genenetwork3 | |
| GeneNetwork3 REST API for data science and machine learning |
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