index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2023-07-19
Make repository a guix channel.
Arun Isaac
2023-07-19
Extract code dealing with ProbeSets to their own module.
Frederick Muriuki Muriithi
2023-07-19
Extract reusable code to separate module
Frederick Muriuki Muriithi
2023-07-18
Bug: Change from `_id` to `id_` to avoid downstream breakage.
Frederick Muriuki Muriithi
2023-07-18
Fix wrong import, and typing issues.
Frederick Muriuki Muriithi
2023-07-18
Fetch a single publication by `PublicationId`
Frederick Muriuki Muriithi
2023-07-18
Fetch metadata for a single phenotype.
Frederick Muriuki Muriithi
2023-07-18
Fetch single phenotype trait by `dataset_id` and `trait_name`.
Frederick Muriuki Muriithi
2023-07-18
Bug: Fetch group name by dataset_id
Frederick Muriuki Muriithi
2023-07-17
Fix dict key name
Frederick Muriuki Muriithi
2023-07-12
Bug: Set the `data_exists` variable within the context manager
Frederick Muriuki Muriithi
2023-07-12
Bug: Retrieve configs from app, not environment
Frederick Muriuki Muriithi
2023-07-12
Move documentation comment to beginning of function
Frederick Muriuki Muriithi
2023-07-11
Revert "Skip tests broken by Python-3.10 temporarily"
Frederick Muriuki Muriithi
2023-07-11
Trigger CI
Munyoki Kilyungi
2023-07-06
Provide the client_id as part of the post request.
Frederick Muriuki Muriithi
2023-07-05
Skip tests broken by Python-3.10 temporarily
Frederick Muriuki Muriithi
2023-07-05
Update test: create throw-away variable
Frederick Muriuki Muriithi
2023-07-04
Fix minor UI bug
Frederick Muriuki Muriithi
2023-07-03
Spruce up UI
Frederick Muriuki Muriithi
2023-07-03
Enable deletion of OAuth2 clients.
Frederick Muriuki Muriithi
2023-06-30
Edit some of the details of OAuth2 clients
Frederick Muriuki Muriithi
2023-06-30
List all OAuth2 clients.
Frederick Muriuki Muriithi
2023-06-23
Fetch all collections, rename variables
Frederick Muriuki Muriithi
2023-06-20
Fix conflicts
zsloan
2023-06-20
Bug: Don't overwrite/delete old collections
Frederick Muriuki Muriithi
2023-06-15
Fetch genotypes from virtuoso
Munyoki Kilyungi
2023-06-13
Namespace session variable
Frederick Muriuki Muriithi
2023-06-12
Delete unused import
Munyoki Kilyungi
2023-06-12
Fetch phenotypes from virtuoso
Munyoki Kilyungi
2023-06-12
Correct publication function docstring
Munyoki Kilyungi
2023-06-12
Delete unused get_trait_metadata function
Munyoki Kilyungi
2023-06-08
Fix bugs with accessing/creating collections
zsloan
2023-06-08
bug: Function expects pathlib.Path not str
Frederick Muriuki Muriithi
2023-06-07
auth: Remove "migrate-data" scope.
Frederick Muriuki Muriithi
2023-06-07
auth: Remove obsoleted scope
Frederick Muriuki Muriithi
2023-06-07
Add publication end-point
Munyoki Kilyungi
2023-06-07
Nest duplicate entries into a list from a sparql result
Munyoki Kilyungi
2023-06-07
Remove trait_metadata endpoint
Munyoki Kilyungi
2023-06-06
Pass geoSeries as a URL
Munyoki Kilyungi
2023-06-06
Rename gn:geoPlatform -> gn:geoPlatformUrl
Munyoki Kilyungi
2023-06-06
Match how dataset metadata is fetched with GN1
Munyoki Kilyungi
2023-06-06
Replace taxon prefix with ncbiTaxon which references NCBI
Munyoki Kilyungi
2023-06-06
Rename dataset_metadata -> dataset
Munyoki Kilyungi
2023-06-05
Logging: Don't allow getting user info to stop application starting
Frederick Muriuki Muriithi
2023-06-05
Logging: Get user information.
Frederick Muriuki Muriithi
2023-06-05
Logging: Get guix profile information if present.
Frederick Muriuki Muriithi
2023-06-05
Logging: Get info about python
Frederick Muriuki Muriithi
2023-06-05
Handle unhandled SQLite3 errors.
Frederick Muriuki Muriithi
2023-06-02
Replace SELECT with CONSTRUCT when fetching a dataset's metadata
Munyoki Kilyungi
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