diff options
Diffstat (limited to 'tests/unit/db/rdf/test_wiki.py')
| -rw-r--r-- | tests/unit/db/rdf/test_wiki.py | 50 |
1 files changed, 50 insertions, 0 deletions
diff --git a/tests/unit/db/rdf/test_wiki.py b/tests/unit/db/rdf/test_wiki.py index 3abf3ad..bab37ce 100644 --- a/tests/unit/db/rdf/test_wiki.py +++ b/tests/unit/db/rdf/test_wiki.py @@ -22,11 +22,15 @@ from tests.fixtures.rdf import ( SPARQL_CONF, ) +from tests.unit.db.rdf.data import LPL_RIF_ENTRIES + from gn3.db.rdf.wiki import ( __sanitize_result, get_wiki_entries_by_symbol, get_comment_history, update_wiki_comment, + get_rif_entries_by_symbol, + delete_wiki_entries_by_id, ) GRAPH = "<http://cd-test.genenetwork.org>" @@ -396,3 +400,49 @@ def test_update_wiki_comment(rdf_setup): # pylint: disable=W0613,W0621 "version": 3, "web_url": "http://some-website.com", }) + + +@pytest.mark.rdf +def test_get_rif_entries_by_symbol(rdf_setup): # pylint: disable=W0613,W0621 + """Test fetching NCBI Rif Metadata from RDF""" + sparql_conf = SPARQL_CONF + entries = get_rif_entries_by_symbol( + symbol="Lpl", + sparql_uri=sparql_conf["sparql_endpoint"], + graph=GRAPH, + ) + assert len(LPL_RIF_ENTRIES["data"]) == len(entries["data"]) + for result, expected in zip(LPL_RIF_ENTRIES["data"], entries["data"]): + TestCase().assertDictEqual(result, expected) + + +@pytest.mark.rdf +def test_delete_wiki_entries_by_id(rdf_setup): # pylint: disable=W0613,W0621 + """Test deleting a given RIF Wiki entry""" + sparql_conf = SPARQL_CONF + delete_wiki_entries_by_id( + 230, + sparql_user=sparql_conf["sparql_user"], + sparql_password=sparql_conf["sparql_password"], + sparql_auth_uri=sparql_conf["sparql_auth_uri"], + graph=GRAPH) + entries = get_comment_history( + comment_id=230, + sparql_uri=sparql_conf["sparql_endpoint"], + graph=GRAPH, + ) + assert len(entries["data"]) == 0 + + # Deleting a non-existent entry has no effect + delete_wiki_entries_by_id( + 199999, + sparql_user=sparql_conf["sparql_user"], + sparql_password=sparql_conf["sparql_password"], + sparql_auth_uri=sparql_conf["sparql_auth_uri"], + graph=GRAPH) + entries = get_comment_history( + comment_id=230, + sparql_uri=sparql_conf["sparql_endpoint"], + graph=GRAPH, + ) + assert len(entries["data"]) == 0 |