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-rw-r--r--tests/unit/correlation/my_results.json388
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-[
-
- {
- "sample_r_correlation_using_genenetwork3":"Results",
-
- },
-
- {
- "index": 1,
- "trait_id": "1445813_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1445813_at:HC_M2_0606_P:ca1b85915ccba7198af3",
- "symbol": "0610012K18Rik",
- "description": "RIKEN cDNA 0610012H03 (no human homolog defined)",
- "location": "Chr17: 14.966404",
- "mean": "6.643",
- "additive": "0.042",
- "lod_score": "2.6",
- "lrs_location": "Chr5: 133.538653",
- "sample_r": "-0.694",
- "num_overlap": 67,
- "sample_p": "7.244e-11",
- "lit_corr": "--",
- "tissue_corr": "--",
- "tissue_pvalue": "--"
- },
- {
- "index": 2,
- "trait_id": "1439910_a_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1439910_a_at:HC_M2_0606_P:0c4c7a3cb088699af36c",
- "symbol": "Tradd",
- "description": "TNFRSF1A-associated via death domain",
- "location": "Chr8: 107.783836",
- "mean": "7.449",
- "additive": "0.039",
- "lod_score": "1.7",
- "lrs_location": "Chr1: 195.987783",
- "sample_r": "-0.692",
- "num_overlap": 67,
- "sample_p": "9.012e-11",
- "lit_corr": "--",
- "tissue_corr": "-0.285",
- "tissue_pvalue": "1.575e-01"
- },
- {
- "index": 3,
- "trait_id": "1421499_a_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1421499_a_at:HC_M2_0606_P:b807253e0829c2592ceb",
- "symbol": "Ptpn14",
- "description": "protein tyrosine phosphatase, non-receptor type 14",
- "location": "Chr1: 191.689356",
- "mean": "6.655",
- "additive": "0.049",
- "lod_score": "2.4",
- "lrs_location": "Chr1: 197.014645",
- "sample_r": "-0.691",
- "num_overlap": 67,
- "sample_p": "1.009e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.242",
- "tissue_pvalue": "2.337e-01"
- },
- {
- "index": 4,
- "trait_id": "1421167_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1421167_at:HC_M2_0606_P:d7b29d02c306e1ae105a",
- "symbol": "Atp11a",
- "description": "ATPase, class VI, type 11A; last four exons and 3' UTR",
- "location": "Chr8: 12.856932",
- "mean": "7.341",
- "additive": "0.050",
- "lod_score": "1.7",
- "lrs_location": "Chr9: 62.226499",
- "sample_r": "-0.690",
- "num_overlap": 67,
- "sample_p": "1.059e-10",
- "lit_corr": "--",
- "tissue_corr": "0.154",
- "tissue_pvalue": "4.522e-01"
- },
- {
- "index": 5,
- "trait_id": "1436525_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1436525_at:HC_M2_0606_P:b36b6c4053c40cc5b25b",
- "symbol": "Ap3s2",
- "description": "adaptor-related protein complex 3, sigma 2 subunit",
- "location": "Chr7: 87.022674",
- "mean": "8.227",
- "additive": "-0.070",
- "lod_score": "3.0",
- "lrs_location": "Chr4: 63.346622",
- "sample_r": "-0.679",
- "num_overlap": 67,
- "sample_p": "2.627e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.059",
- "tissue_pvalue": "7.750e-01"
- },
- {
- "index": 6,
- "trait_id": "1450824_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1450824_at:HC_M2_0606_P:fa9b15d1d4a2d629decb",
- "symbol": "Ptch1",
- "description": "patched homolog 1",
- "location": "Chr13: 63.612887",
- "mean": "7.105",
- "additive": "0.070",
- "lod_score": "3.9",
- "lrs_location": "Chr5: 133.538653",
- "sample_r": "-0.679",
- "num_overlap": 67,
- "sample_p": "2.771e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.360",
- "tissue_pvalue": "7.075e-02"
- },
- {
- "index": 7,
- "trait_id": "1450540_x_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1450540_x_at:HC_M2_0606_P:0836630187705e0a98ed",
- "symbol": "Krtap5-1",
- "description": "keratin associated protein 5-1",
- "location": "Chr7: 149.482282",
- "mean": "7.584",
- "additive": "0.059",
- "lod_score": "2.2",
- "lrs_location": "Chr5: 140.893042",
- "sample_r": "-0.678",
- "num_overlap": 67,
- "sample_p": "2.828e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.486",
- "tissue_pvalue": "1.174e-02"
- },
- {
- "index": 8,
- "trait_id": "1454403_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1454403_at:HC_M2_0606_P:d6625a44bb78d0c9a7bc",
- "symbol": "Fgd5",
- "description": "FYVE, RhoGEF and PH domain containing 5",
- "location": "Chr6: 91.964079",
- "mean": "6.447",
- "additive": "-0.036",
- "lod_score": "1.8",
- "lrs_location": "Chr8: 7.701081",
- "sample_r": "-0.669",
- "num_overlap": 67,
- "sample_p": "5.895e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.209",
- "tissue_pvalue": "3.062e-01"
- },
- {
- "index": 9,
- "trait_id": "1444162_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1444162_at:HC_M2_0606_P:fea27946a4ed1ee2b47a",
- "symbol": "Frs2",
- "description": "fibroblast growth factor receptor substrate 2",
- "location": "Chr10: 116.521472",
- "mean": "5.677",
- "additive": "-0.040",
- "lod_score": "1.8",
- "lrs_location": "Chr4: 66.843058",
- "sample_r": "-0.666",
- "num_overlap": 67,
- "sample_p": "7.946e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.241",
- "tissue_pvalue": "2.352e-01"
- },
- {
- "index": 10,
- "trait_id": "1451876_a_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1451876_a_at:HC_M2_0606_P:eb879785591c3c2addeb",
- "symbol": "Trp63",
- "description": "transformation related protein 63",
- "location": "Chr16: 25.884897",
- "mean": "6.207",
- "additive": "0.059",
- "lod_score": "2.0",
- "lrs_location": "Chr9: 74.382952",
- "sample_r": "-0.664",
- "num_overlap": 67,
- "sample_p": "8.743e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.187",
- "tissue_pvalue": "3.601e-01"
- },
- {
- "index": 11,
- "trait_id": "1457795_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1457795_at:HC_M2_0606_P:617d62e702f1f04b065d",
- "symbol": "Scamp4",
- "description": "secretory carrier membrane protein 4",
- "location": "Chr10: 80.076487",
- "mean": "7.060",
- "additive": "-0.042",
- "lod_score": "2.4",
- "lrs_location": "Chr11: 58.923978",
- "sample_r": "-0.663",
- "num_overlap": 67,
- "sample_p": "9.806e-10",
- "lit_corr": "--",
- "tissue_corr": "-0.040",
- "tissue_pvalue": "8.462e-01"
- },
- {
- "index": 12,
- "trait_id": "1439472_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1439472_at:HC_M2_0606_P:f52f356bf5d00add1ba9",
- "symbol": "Gcn1l1",
- "description": "general control of amino-acid synthesis 1-like 1",
- "location": "Chr5: 116.033483",
- "mean": "7.325",
- "additive": "0.058",
- "lod_score": "3.1",
- "lrs_location": "Chr1: 196.404284",
- "sample_r": "-0.662",
- "num_overlap": 67,
- "sample_p": "1.075e-09",
- "lit_corr": "--",
- "tissue_corr": "-0.205",
- "tissue_pvalue": "3.157e-01"
- },
- {
- "index": 13,
- "trait_id": "1422074_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1422074_at:HC_M2_0606_P:4acd73cfd3d194327d79",
- "symbol": "Cdx2",
- "description": "caudal type homeo box 2",
- "location": "Chr5: 148.113293",
- "mean": "6.415",
- "additive": "-0.037",
- "lod_score": "1.8",
- "lrs_location": "Chr2: 180.825581",
- "sample_r": "-0.661",
- "num_overlap": 67,
- "sample_p": "1.140e-09",
- "lit_corr": "--",
- "tissue_corr": "0.002",
- "tissue_pvalue": "9.926e-01"
- },
- {
- "index": 14,
- "trait_id": "1429140_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1429140_at:HC_M2_0606_P:16116d150fd7a8d09687",
- "symbol": "Spns3",
- "description": "spinster homolog 3; exons 10, 12, and proximal 3' UTR",
- "location": "Chr11: 72.311676",
- "mean": "7.194",
- "additive": "0.050",
- "lod_score": "2.1",
- "lrs_location": "Chr9: 69.810185",
- "sample_r": "-0.661",
- "num_overlap": 67,
- "sample_p": "1.175e-09",
- "lit_corr": "--",
- "tissue_corr": "0.557",
- "tissue_pvalue": "3.116e-03"
- },
- {
- "index": 15,
- "trait_id": "1437477_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1437477_at:HC_M2_0606_P:990d16df933d7bb03428",
- "symbol": "Lrrfip1",
- "description": "leucine rich repeat (in FLII) interacting protein 1",
- "location": "Chr1: 93.011523",
- "mean": "7.597",
- "additive": "0.068",
- "lod_score": "2.3",
- "lrs_location": "Chr5: 133.538653",
- "sample_r": "-0.658",
- "num_overlap": 67,
- "sample_p": "1.393e-09",
- "lit_corr": "--",
- "tissue_corr": "0.132",
- "tissue_pvalue": "5.204e-01"
- },
- {
- "index": 16,
- "trait_id": "1440212_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1440212_at:HC_M2_0606_P:01ae82e4856177dd9d89",
- "symbol": "Slc12a1",
- "description": "solute carrier family 12, member 1",
- "location": "Chr2: 124.990152",
- "mean": "7.061",
- "additive": "0.038",
- "lod_score": "2.2",
- "lrs_location": "Chr1: 193.731996",
- "sample_r": "-0.655",
- "num_overlap": 67,
- "sample_p": "1.769e-09",
- "lit_corr": "--",
- "tissue_corr": "0.028",
- "tissue_pvalue": "8.923e-01"
- },
- {
- "index": 17,
- "trait_id": "1419755_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1419755_at:HC_M2_0606_P:15fea7c69b0d5faa1298",
- "symbol": "Mfi2",
- "description": "antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5",
- "location": "Chr16: 31.898518",
- "mean": "6.697",
- "additive": "-0.038",
- "lod_score": "2.0",
- "lrs_location": "Chr4: 50.881071",
- "sample_r": "-0.654",
- "num_overlap": 67,
- "sample_p": "1.950e-09",
- "lit_corr": "--",
- "tissue_corr": "0.244",
- "tissue_pvalue": "2.305e-01"
- },
- {
- "index": 18,
- "trait_id": "1425457_a_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1425457_a_at:HC_M2_0606_P:669c485b158c0207026c",
- "symbol": "Grb10",
- "description": "growth factor receptor bound protein 10",
- "location": "Chr11: 11.833500",
- "mean": "6.515",
- "additive": "0.081",
- "lod_score": "3.9",
- "lrs_location": "Chr5: 133.538653",
- "sample_r": "-0.652",
- "num_overlap": 67,
- "sample_p": "2.295e-09",
- "lit_corr": "--",
- "tissue_corr": "-0.090",
- "tissue_pvalue": "6.617e-01"
- },
- {
- "index": 19,
- "trait_id": "1431329_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1431329_at:HC_M2_0606_P:a6df7ed818ea0042c550",
- "symbol": "Nphp4",
- "description": "nephronophthisis 4 (renal tubular development and function)",
- "location": "Chr4: 151.863271",
- "mean": "6.191",
- "additive": "0.039",
- "lod_score": "1.9",
- "lrs_location": "ChrX: 112.637353",
- "sample_r": "-0.652",
- "num_overlap": 67,
- "sample_p": "2.330e-09",
- "lit_corr": "--",
- "tissue_corr": "-0.104",
- "tissue_pvalue": "6.144e-01"
- },
- {
- "index": 20,
- "trait_id": "1443987_at",
- "dataset": "HC_M2_0606_P",
- "hmac": "1443987_at:HC_M2_0606_P:681e6c787b4d652d0c07",
- "symbol": "Klhl18",
- "description": "kelch-like 18 (Drosophila)",
- "location": "Chr9: 110.330597",
- "mean": "7.244",
- "additive": "-0.070",
- "lod_score": "2.1",
- "lrs_location": "Chr15: 13.149248",
- "sample_r": "-0.650",
- "num_overlap": 67,
- "sample_p": "2.561e-09",
- "lit_corr": "--",
- "tissue_corr": "-0.200",
- "tissue_pvalue": "3.270e-01"
- }
-] \ No newline at end of file
generated by cgit v1.2.3 (git 2.44.0) at 2024-10-19 05:27:32 +0000