diff options
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/llms/process.py | 23 |
1 files changed, 6 insertions, 17 deletions
diff --git a/gn3/llms/process.py b/gn3/llms/process.py index d53a7fd..ab2a80e 100644 --- a/gn3/llms/process.py +++ b/gn3/llms/process.py @@ -116,22 +116,11 @@ def get_gnqa(query, auth_token, data_dir=""): answer references: contains doc_name,reference,pub_med_info """ - api_client = GeneNetworkQAClient(api_key=auth_token) res, task_id = api_client.ask('?ask=' + quote(query), query=query) - if task_id == 0: - raise RuntimeError(f"Error connecting to Fahamu Api: {str(res)}") - res, status = api_client.get_answer(task_id) - if status == 1: - resp_text = filter_response_text(res.text) - if resp_text.get("data") is None: - return task_id, "Please try to rephrase your question to receive feedback", [] - answer = resp_text['data']['answer'] - context = resp_text['data']['context'] - references = parse_context( - context, DocIDs().get_info, format_bibliography_info) - references = fetch_pubmed(references, "pubmed.json", data_dir) - - return task_id, answer, references - else: - return task_id, "We couldn't provide a response,Please try to rephrase your question to receive feedback", [] + res, _status = api_client.get_answer(task_id) + resp_text = filter_response_text(res.text) + answer = resp_text['data']['answer'] + context = resp_text['data']['context'] + return task_id, answer, fetch_pubmed(parse_context( + context, DocIDs().get_info, format_bibliography_info), "pubmed.json", data_dir) |