diff options
Diffstat (limited to 'gn3')
| -rw-r--r-- | gn3/heatmaps.py | 6 |
1 files changed, 5 insertions, 1 deletions
diff --git a/gn3/heatmaps.py b/gn3/heatmaps.py index 1a528ba..b6822d4 100644 --- a/gn3/heatmaps.py +++ b/gn3/heatmaps.py @@ -142,7 +142,11 @@ def build_heatmap( traits_filename) main_output, _permutations_output = run_reaper( - app.config['REAPER_COMMAND'], genotype_filename, traits_filename, separate_nperm_output=True) + app.config['REAPER_COMMAND'], + genotype_filename, + traits_filename, + separate_nperm_output=True + ) qtlresults = parse_reaper_main_results(main_output) organised = organise_reaper_main_results(qtlresults) |