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-rw-r--r--gn3/db/correlations.py20
1 files changed, 0 insertions, 20 deletions
diff --git a/gn3/db/correlations.py b/gn3/db/correlations.py
index f43b8a5..39ed499 100644
--- a/gn3/db/correlations.py
+++ b/gn3/db/correlations.py
@@ -281,26 +281,6 @@ def fetch_gene_symbol_tissue_value_dict_for_trait(
return fetch_gene_symbol_tissue_value_dict(xref_info[0], xref_info[2], conn)
return {}
-def correlations_of_all_tissue_traits(
- trait_symbol: str, probeset_freeze_id: int,
- method: str, conn: Any) -> Tuple[dict, dict]:
- """
- Computes and returns the correlation of all tissue traits.
-
- This is a migration of the
- `web.webqtl.correlation.correlationFunction.calculateCorrOfAllTissueTrait`
- function in GeneNetwork1.
- """
- primary_trait_symbol_value_dict = fetch_gene_symbol_tissue_value_dict_for_trait(
- (trait_symbol,), probeset_freeze_id, conn)
- primary_trait_value = primary_trait_symbol_value_dict.vlaues()[0]
- symbol_value_dict = fetch_gene_symbol_tissue_value_dict_for_trait(
- tuple(), probeset_freeze_id, conn)
- if method == "1":
- return batch_computed_tissue_correlation(
- primaryTraitValue,SymbolValueDict,method='spearman')
- return batch_computed_tissue_correlation(primaryTraitValue,SymbolValueDict)
-
def build_temporary_tissue_correlations_table(
trait_symbol: str, probeset_freeze_id: int, method: str,
return_number: int, conn: Any) -> str: