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-rw-r--r--gn3/computations/rust_correlation.py7
1 files changed, 3 insertions, 4 deletions
diff --git a/gn3/computations/rust_correlation.py b/gn3/computations/rust_correlation.py
index c2783f1..0539527 100644
--- a/gn3/computations/rust_correlation.py
+++ b/gn3/computations/rust_correlation.py
@@ -15,7 +15,8 @@ from gn3.settings import CORRELATION_COMMAND
from gn3.settings import TMPDIR
-def generate_input_files(dataset: list[str], output_dir: str = TMPDIR):
+def generate_input_files(dataset: list[str],
+ output_dir: str = TMPDIR) ->(str, str):
"""function generates outputfiles and inputfiles"""
tmp_dir = f"{output_dir}/correlation"
@@ -65,9 +66,7 @@ def run_correlation(dataset, trait_vals:
command_list = [CORRELATION_COMMAND, json_file, TMPDIR]
- results = subprocess.run(command_list, check=True)
-
- return results
+ return subprocess.run(command_list, check=True)
def parse_correlation_output(result_file: str):