diff options
Diffstat (limited to 'gn3/api')
| -rw-r--r-- | gn3/api/rqtl.py | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/gn3/api/rqtl.py b/gn3/api/rqtl.py index e029d8d..30173f9 100644 --- a/gn3/api/rqtl.py +++ b/gn3/api/rqtl.py @@ -9,7 +9,7 @@ from flask import request from gn3.computations.rqtl import generate_rqtl_cmd, process_rqtl_mapping, \ process_rqtl_pairscan, process_perm_output -from gn3.fs_helpers import assert_paths_exist, get_tmpdir +from gn3.fs_helpers import assert_path_exists, get_tmpdir rqtl = Blueprint("rqtl", __name__) @@ -22,7 +22,8 @@ run the rqtl_wrapper script and return the results as JSON genofile = request.form['geno_file'] phenofile = request.form['pheno_file'] - assert_paths_exist([genofile, phenofile]) + assert_path_exists(genofile) + assert_path_exists(phenofile) # Split kwargs by those with values and boolean ones that just convert to True/False kwargs = ["covarstruct", "model", "method", "nperm", "scale", "control"] |