diff options
| -rw-r--r-- | gn3/computations/rqtl2.py | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py index 2a9c82e..0d60ec0 100644 --- a/gn3/computations/rqtl2.py +++ b/gn3/computations/rqtl2.py @@ -1,8 +1,10 @@ +"""Module contains functions to parse and process rqtl2 input and output""" import os import csv import uuid import json + def generate_rqtl2_files(data, workspace_dir): """Prepare data and generate necessary CSV files required to write to control_file @@ -89,7 +91,6 @@ def prepare_files(tmpdir): create_file(file_path) return workspace_dir, input_file, output_file, log_file - def write_input_file(input_file, workspace_dir, data): """ Write input data to a json file to be passed @@ -99,5 +100,3 @@ def write_input_file(input_file, workspace_dir, data): # todo choose a better variable name rqtl2_files = generate_rqtl2_files(data, workspace_dir) json.dump(rqtl2_files, file_handler) - - |