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| author | Alexander_Kabui | 2025-01-23 14:08:34 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2025-02-06 12:43:15 +0300 |
| commit | c2d280ba4a8fc0f83fe1763fe4016da472e0cf72 (patch) | |
| tree | 542a424cdabf5cd47e16e2e7bfa4acbd7e434bd2 | |
| parent | 800aecc5fc3e0f17e2a5a1280bf9aec035d40176 (diff) | |
| download | genenetwork3-c2d280ba4a8fc0f83fe1763fe4016da472e0cf72.tar.gz | |
feat: Add module docstring for rqtl2 computations.
| -rw-r--r-- | gn3/computations/rqtl2.py | 5 |
1 files changed, 2 insertions, 3 deletions
diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py index 2a9c82e..0d60ec0 100644 --- a/gn3/computations/rqtl2.py +++ b/gn3/computations/rqtl2.py @@ -1,8 +1,10 @@ +"""Module contains functions to parse and process rqtl2 input and output""" import os import csv import uuid import json + def generate_rqtl2_files(data, workspace_dir): """Prepare data and generate necessary CSV files required to write to control_file @@ -89,7 +91,6 @@ def prepare_files(tmpdir): create_file(file_path) return workspace_dir, input_file, output_file, log_file - def write_input_file(input_file, workspace_dir, data): """ Write input data to a json file to be passed @@ -99,5 +100,3 @@ def write_input_file(input_file, workspace_dir, data): # todo choose a better variable name rqtl2_files = generate_rqtl2_files(data, workspace_dir) json.dump(rqtl2_files, file_handler) - - |