diff options
| -rw-r--r-- | gn3/api/metadata.py | 1 | ||||
| -rw-r--r-- | gn3/db/datasets.py | 24 |
2 files changed, 13 insertions, 12 deletions
diff --git a/gn3/api/metadata.py b/gn3/api/metadata.py index fbdc8f5..7334abb 100644 --- a/gn3/api/metadata.py +++ b/gn3/api/metadata.py @@ -38,6 +38,7 @@ DATASET_CONTEXT = { "description": "dct:description", "ex": "http://example.org/stuff/1.0/", "experimentDesignInfo": "gnt:hasExperimentDesignInfo", + "experimentType": "gnt:hasExperimentType", "foaf": "http://xmlns.com/foaf/0.1/", "geoSeriesId": "gnt:hasGeoSeriesId", "gnt": "http://genenetwork.org/term/", diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py index 6ec2126..043be4c 100644 --- a/gn3/db/datasets.py +++ b/gn3/db/datasets.py @@ -337,18 +337,18 @@ def retrieve_dataset_metadata(name: str) -> dict: """Return the full data given a path, NAME""" result = {} __subject = { - "summary": "dct:description", - "tissue": "gnt:hasTissueInfo", - "specifics": "gnt:hasTissueInfo", - "cases": "gnt:hasCaseInfo", - "platform": "gnt:hasPlatformInfo", - "processing": "gnt:hasDataProcessingInfo", - "notes": "gnt:hasNotes", - "experiment-design": "gnt:hasExperimentDesignInfo", - "acknowledgment": "gnt:hasAcknowledgement", - "citation": "dct:isReferencedBy", - "experiment-type": "gnt:hasExperimentType", - "contributors": "dct:creator", + "summary": "description", + "tissue": "tissueInfo", + "specifics": "specifics", + "cases": "caseInfo", + "platform": "platformInfo", + "processing": "processingInfo", + "notes": "notes", + "experiment-design": "experimentDesignInfo", + "acknowledgment": "acknowledgement", + "citation": "citation", + "experiment-type": "experimentType", + "contributors": "contributors", } for __file in Path(name).glob("*rtf"): with __file.open() as _f: |