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authorFrederick Muriuki Muriithi2024-09-27 14:01:04 -0500
committerFrederick Muriuki Muriithi2024-09-27 14:01:04 -0500
commitf20a1a9f9f5c052f756b917fdce052efc8203f87 (patch)
tree2f4df8ea47e5e30e985ea9f52c236244748bf957 /tests/unit/db/rdf
parent4940195460008192b6ca6269e1fb8c172ada4f17 (diff)
downloadgenenetwork3-f20a1a9f9f5c052f756b917fdce052efc8203f87.tar.gz
Use existing fixture to retrieve settings.
Diffstat (limited to 'tests/unit/db/rdf')
-rw-r--r--tests/unit/db/rdf/test_wiki.py11
1 files changed, 6 insertions, 5 deletions
diff --git a/tests/unit/db/rdf/test_wiki.py b/tests/unit/db/rdf/test_wiki.py
index 5f36034..c737f29 100644
--- a/tests/unit/db/rdf/test_wiki.py
+++ b/tests/unit/db/rdf/test_wiki.py
@@ -29,8 +29,6 @@ from gn3.db.rdf.wiki import (
update_wiki_comment,
)
-
-SPARQL_CONF = get_sparql_auth_conf()
GRAPH = "<http://cd-test.genenetwork.org>"
@@ -187,8 +185,9 @@ def test_sanitize_result(result, expected):
@pytest.mark.rdf
-def test_get_wiki_entries_by_symbol(rdf_setup): # pylint: disable=W0613,W0621
+def test_get_wiki_entries_by_symbol(fxtr_app_config, rdf_setup): # pylint: disable=W0613,W0621
"""Test that wiki entries are fetched correctly by symbol"""
+ SPARQL_CONF = get_sparql_auth_conf(fxtr_app_config)
result = get_wiki_entries_by_symbol(
symbol="ckb",
sparql_uri=SPARQL_CONF["sparql_endpoint"],
@@ -261,8 +260,9 @@ and C1QL3 (CTRP13).",
@pytest.mark.rdf
-def test_get_comment_history(rdf_setup): # pylint: disable=W0613,W0621
+def test_get_comment_history(fxtr_app_config, rdf_setup): # pylint: disable=W0613,W0621
"""Test fetching a comment's history from RDF"""
+ SPARQL_CONF = get_sparql_auth_conf(fxtr_app_config)
result = get_comment_history(
comment_id=1158,
sparql_uri=SPARQL_CONF["sparql_endpoint"],
@@ -353,8 +353,9 @@ Possible 3' UTR variants.",
@pytest.mark.rdf
-def test_update_wiki_comment(rdf_setup): # pylint: disable=W0613,W0621
+def test_update_wiki_comment(fxtr_app_config, rdf_setup): # pylint: disable=W0613,W0621
"""Test that a comment is updated correctly"""
+ SPARQL_CONF = get_sparql_auth_conf(fxtr_app_config)
update_wiki_comment(
insert_dict={
"Id": 230,