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authorAlexander Kabui2021-06-14 13:36:40 +0300
committerAlexander Kabui2021-06-14 13:36:40 +0300
commit57a6af689e85e5cbfe0a825d5b84ed9c451e6ad7 (patch)
treec151d405b40186d00d99a42aee715f441b25b6fc /tests/unit/computations/test_correlation.py
parent9d6af6049fa73c6aae4d224245d319e87bccbd6a (diff)
downloadgenenetwork3-57a6af689e85e5cbfe0a825d5b84ed9c451e6ad7.tar.gz
add biweight r script and tests
Diffstat (limited to 'tests/unit/computations/test_correlation.py')
-rw-r--r--tests/unit/computations/test_correlation.py6
1 files changed, 4 insertions, 2 deletions
diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py
index 5746adf..606f96d 100644
--- a/tests/unit/computations/test_correlation.py
+++ b/tests/unit/computations/test_correlation.py
@@ -98,12 +98,14 @@ class TestCorrelation(TestCase):
self.assertEqual(results, expected_results)
- def test_bicor(self):
+ @mock.patch("gn3.computations.correlations.call_biweight_script")
+ def test_bicor(self, mock_biweight):
"""Test for doing biweight mid correlation """
+ mock_biweight.return_value = (1.0, 0.0)
results = do_bicor(x_val=[1, 2, 3], y_val=[4, 5, 6])
- self.assertEqual(results, (0.0, 0.0)
+ self.assertEqual(results, (1.0, 0.0)
)
@mock.patch("gn3.computations.correlations.compute_corr_coeff_p_value")