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authorFrederick Muriuki Muriithi2022-03-25 16:13:00 +0300
committerFrederick Muriuki Muriithi2022-03-26 15:04:47 +0300
commitfd39b8ce0ad86c85636a09ca3ac15975fabf776a (patch)
tree6cd594142b5eea2e1f5ee135b9ee758f81926eda /tests/integration/test_partial_correlations.py
parent7a93ecb4399241541af56c12247202874fbfe2d9 (diff)
downloadgenenetwork3-fd39b8ce0ad86c85636a09ca3ac15975fabf776a.tar.gz
Create a fixture for pcorrs datafixture-for-pcorrs
Diffstat (limited to 'tests/integration/test_partial_correlations.py')
-rw-r--r--tests/integration/test_partial_correlations.py5
1 files changed, 3 insertions, 2 deletions
diff --git a/tests/integration/test_partial_correlations.py b/tests/integration/test_partial_correlations.py
index d249b42..e047e3d 100644
--- a/tests/integration/test_partial_correlations.py
+++ b/tests/integration/test_partial_correlations.py
@@ -213,7 +213,7 @@ def test_partial_correlation_api_with_non_existent_control_traits(client, post_d
# traits data set to something we are in control of
)
def test_part_corr_api_with_mix_of_existing_and_non_existing_control_traits(
- db_conn, primary, controls, method, target):
+ db_conn_with_pcorrs_data, primary, controls, method, target):
"""
Check that calling the function with a mix of existing and missing control
traits raises an warning.
@@ -221,4 +221,5 @@ def test_part_corr_api_with_mix_of_existing_and_non_existing_control_traits(
criteria = 10
with pytest.warns(UserWarning):
partial_correlations_entry(
- db_conn, primary, controls, method, criteria, target)
+ db_conn_with_pcorrs_data, primary, controls, method, criteria,
+ target)