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authorFrederick Muriuki Muriithi2023-04-06 12:31:05 +0300
committerFrederick Muriuki Muriithi2023-04-06 12:31:05 +0300
commit17abad9300e4a96a14f94da486ef8307f7d27e06 (patch)
tree38fe3bfd36be9a821adfc67b83fbbd587ceb8b5e /tests/integration/test_correlation.py
parent3d873435f0d464864d4d691d6be4db40931fac05 (diff)
downloadgenenetwork3-17abad9300e4a96a14f94da486ef8307f7d27e06.tar.gz
Remove deprecated `gn3.db_utils.database_connector` function
Remove the deprecated function and fix a myriad of bugs that arise from removing the function. Issue: https://issues.genenetwork.org/issues/bugfix_coupling_current_app_and_db_utils
Diffstat (limited to 'tests/integration/test_correlation.py')
-rw-r--r--tests/integration/test_correlation.py10
1 files changed, 5 insertions, 5 deletions
diff --git a/tests/integration/test_correlation.py b/tests/integration/test_correlation.py
index c1d518d..51769b5 100644
--- a/tests/integration/test_correlation.py
+++ b/tests/integration/test_correlation.py
@@ -65,15 +65,15 @@ class CorrelationIntegrationTest(TestCase):
@pytest.mark.integration_test
@mock.patch("gn3.api.correlation.compute_all_lit_correlation")
- @mock.patch("gn3.api.correlation.database_connector")
- def test_lit_correlation(self, database_connector, mock_compute_corr):
+ @mock.patch("gn3.api.correlation.database_connection")
+ def test_lit_correlation(self, database_connection, mock_compute_corr):
"""Test api/correlation/lit_corr/{species}/{gene_id}"""
mock_compute_corr.return_value = []
- database_connector.return_value = mock.Mock()
- database_connector.return_value.__enter__ = mock.Mock()
- database_connector.return_value.__exit__ = mock.Mock()
+ database_connection.return_value = mock.Mock()
+ database_connection.return_value.__enter__ = mock.Mock()
+ database_connection.return_value.__exit__ = mock.Mock()
post_data = {"1426678_at": "68031",
"1426679_at": "68036",