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authorMuriithi Frederick Muriuki2021-07-23 09:18:40 +0300
committerMuriithi Frederick Muriuki2021-07-23 09:18:40 +0300
commit278f1a18b59b1cadd04c50a9af35b5aece4d722d (patch)
tree7cf307f6fb0443c644fd051e51d65688c3846cf3 /scripts/rqtl_wrapper.R
parent8705e9186051fb5d11d150991c49f6f73056183b (diff)
downloadgenenetwork3-278f1a18b59b1cadd04c50a9af35b5aece4d722d.tar.gz
Add data examples for `slink`. Implement function.
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/computations/slink.py: Copy the function, mostly verbatim from genenetwork1. See: https://github.com/genenetwork/genenetwork1/blob/master/web/webqtl/heatmap/slink.py#L107-L138 * tests/unit/computations/test_slink.py: Add a test with some example data to test that the implementation gives the same results as that in genenetwork1
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