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| author | Alexander_Kabui | 2024-10-29 20:31:42 +0300 |
|---|---|---|
| committer | Alexander_Kabui | 2024-10-29 20:31:42 +0300 |
| commit | 4c303f6c43173c1b87f6f675b1db865f4c25a7b0 (patch) | |
| tree | f3697a1a0f023dc2de6066935074afbeeb9d592e /scripts/rqtl2_wrapper.R | |
| parent | 82ae3c5c7efa710d34b11e28c89c608a475e9071 (diff) | |
| download | genenetwork3-4c303f6c43173c1b87f6f675b1db865f4c25a7b0.tar.gz | |
Refactor: make plot in the temp directory passed in the script arguments.
Diffstat (limited to 'scripts/rqtl2_wrapper.R')
| -rw-r--r-- | scripts/rqtl2_wrapper.R | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/scripts/rqtl2_wrapper.R b/scripts/rqtl2_wrapper.R index cdbbd17..ab3fa3e 100644 --- a/scripts/rqtl2_wrapper.R +++ b/scripts/rqtl2_wrapper.R @@ -330,7 +330,7 @@ generate_lod_plot <- function(cross, scan_result, method, base_dir = ".") { } -lod_plot_path <- generate_lod_plot(dataset, scan_results, "HK") +lod_plot_path <- generate_lod_plot(dataset, scan_results, "HK", base_dir=opt$directory) lod_plot_path |