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authorMuriithi Frederick Muriuki2021-08-12 17:21:44 +0300
committerArun Isaac2021-08-18 08:47:34 +0000
commit3d1595d1fcc5085621ef8ce41a007d283595c7c6 (patch)
tree2580896397b6a9bb203a7be3b9ee7c931605b5b7 /guix.scm
parent70ed53f03f3d74877d5bc71e49e3a1e65af8b15f (diff)
downloadgenenetwork3-3d1595d1fcc5085621ef8ce41a007d283595c7c6.tar.gz
Initialise heatmap generation module
Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * gn3/heatmaps/heatmaps.py: Initialise the module with some code to be used to test out plotly features on the command-line. * guix.scm: Add `python-plotly` and `python-pandas` as dependencies.
Diffstat (limited to 'guix.scm')
-rw-r--r--guix.scm5
1 files changed, 4 insertions, 1 deletions
diff --git a/guix.scm b/guix.scm
index f94fe1a..729d089 100644
--- a/guix.scm
+++ b/guix.scm
@@ -38,6 +38,7 @@
(gn packages python)
(gnu packages base)
(gnu packages check)
+ (gnu packages graph)
(gnu packages cran)
(gnu packages databases)
(gnu packages statistics)
@@ -101,7 +102,9 @@
,python-sqlalchemy-stubs)
("r-optparse" ,r-optparse)
("r-qtl" ,r-qtl)
- ("r-stringi" ,r-stringi)))
+ ("r-stringi" ,r-stringi)
+ ("python-plotly" ,python-plotly)
+ ("python-pandas" ,python-pandas)))
(build-system python-build-system)
(home-page "https://github.com/genenetwork/genenetwork3")
(synopsis "GeneNetwork3 API for data science and machine learning.")