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authorAlexander Kabui2021-04-12 09:54:12 +0300
committerGitHub2021-04-12 09:54:12 +0300
commit31ac939f58bf7b6d353ced995ca395376203b25f (patch)
tree41770a0e4ec3441045fca9bc48de794e444b80ba /guix.scm
parent5151987063eab58b10a2dd8e831ec036df217531 (diff)
downloadgenenetwork3-31ac939f58bf7b6d353ced995ca395376203b25f.tar.gz
Integrate correlation API
- add new api for gn2-gn3 sample r integration - delete map for sample list to values - add db util file - add python msql-client dependency - add db for fetching lit correlation results - add unittests for db utils - add tests for db_utils - modify api for fetching lit correlation results - refactor Mock Database Connector and unittests - add sql url parser - add SQL URI env variable - refactor code for db utils - modify return data for lit correlation - refactor tissue correlation endpoint - replace db_instance with conn
Diffstat (limited to 'guix.scm')
-rw-r--r--guix.scm2
1 files changed, 1 insertions, 1 deletions
diff --git a/guix.scm b/guix.scm
index 4f4e3b2..a810a12 100644
--- a/guix.scm
+++ b/guix.scm
@@ -78,7 +78,7 @@
("python-pylint" python-pylint)
("python-redis" ,python-redis)
("python-scipy" ,python-scipy)
- ("python-scipy" ,python-scipy)
+ ("python-mysqlclient" ,python-mysqlclient)
("python-sqlalchemy-stubs" ,python-sqlalchemy-stubs)))
(build-system python-build-system)
(home-page "https://github.com/genenetwork/genenetwork3")