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author | BonfaceKilz | 2021-05-20 21:25:48 +0300 |
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committer | zsloan | 2021-06-18 22:08:04 +0000 |
commit | 2face963fcba5b3231e9cc26a38f1370b00eb7b0 (patch) | |
tree | a50dce938575169d1310af62bb4468eeff874fd9 /gn3 | |
parent | 1b6ed578ac251daf19ca2299870a0e7e9a3eb6cc (diff) | |
download | genenetwork3-2face963fcba5b3231e9cc26a38f1370b00eb7b0.tar.gz |
db: phenotypes: Add function for fetching a single result
* gn3/db/phenotypes.py (fetchone): New function.
Diffstat (limited to 'gn3')
-rw-r--r-- | gn3/db/phenotypes.py | 17 |
1 files changed, 17 insertions, 0 deletions
diff --git a/gn3/db/phenotypes.py b/gn3/db/phenotypes.py index c3ad683..96cb275 100644 --- a/gn3/db/phenotypes.py +++ b/gn3/db/phenotypes.py @@ -142,3 +142,20 @@ def update(conn: Any, with conn.cursor() as cursor: cursor.execute(sql) return cursor.rowcount + + +def fetchone(conn: Any, + table: str, + where: Dataclass) -> Optional[Dataclass]: + """Run a SELECT on a table. Returns only one result!""" + if not any(astuple(where)): + return None + sql = f"SELECT * FROM {table} " + sql += "WHERE " + sql += "AND ".join(f"{TABLEMAP[table].get(k)} = " + f"'{escape_string(str(v)).decode('utf-8')}'" for + k, v in asdict(where).items() + if v is not None and k in TABLEMAP[table]) + with conn.cursor() as cursor: + cursor.execute(sql) + return DATACLASSMAP[table](*cursor.fetchone()) |