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authorzsloan2021-08-11 17:36:18 +0000
committerzsloan2022-03-22 19:08:01 +0000
commit35f0784ee32ccc76416d184ac65e8cad6f7aa490 (patch)
tree3b311b0a3db39003c48fd83854bf8a6c02e9d289 /gn3
parentf494a9462ddb22c117b16be9b4191564b3191c01 (diff)
downloadgenenetwork3-35f0784ee32ccc76416d184ac65e8cad6f7aa490.tar.gz
Removed quotes from beginning and end of chromosome string
Diffstat (limited to 'gn3')
-rw-r--r--gn3/computations/rqtl.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/computations/rqtl.py b/gn3/computations/rqtl.py
index 092fac6..36c9fa2 100644
--- a/gn3/computations/rqtl.py
+++ b/gn3/computations/rqtl.py
@@ -119,7 +119,7 @@ def pairscan_for_figure(file_name: str) -> Dict:
if i == 0: # Skip first line
continue
line_items = [item.rstrip('\n') for item in line.split(",")]
- chr_list.append(line_items[1])
+ chr_list.append(line_items[1][1:-1])
pos_list.append(line_items[2])
figure_data['chr'] = chr_list
figure_data['pos'] = pos_list