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authorzsloan2021-09-03 15:38:43 +0000
committerzsloan2021-09-03 15:38:43 +0000
commit00be7692a53f0199247a994a6494481f57142a9a (patch)
tree838ed65c139d449a24e69a79a443a31f19c790f1 /gn3
parent79d19f4ce5cdce7f78128e8d7321dfa701e1d04b (diff)
downloadgenenetwork3-00be7692a53f0199247a994a6494481f57142a9a.tar.gz
Add covarstruct as a possible keyword for the rqtl_wrapper.R script (not integrated into the script yet though)
Diffstat (limited to 'gn3')
-rw-r--r--gn3/api/rqtl.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/api/rqtl.py b/gn3/api/rqtl.py
index ebb746c..b5627c5 100644
--- a/gn3/api/rqtl.py
+++ b/gn3/api/rqtl.py
@@ -24,7 +24,7 @@ run the rqtl_wrapper script and return the results as JSON
raise FileNotFoundError
# Split kwargs by those with values and boolean ones that just convert to True/False
- kwargs = ["model", "method", "nperm", "scale", "control_marker"]
+ kwargs = ["covarstruct", "model", "method", "nperm", "scale", "control_marker"]
boolean_kwargs = ["addcovar", "interval", "pstrata"]
all_kwargs = kwargs + boolean_kwargs