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| author | zsloan | 2021-10-12 20:56:31 +0000 |
|---|---|---|
| committer | zsloan | 2021-10-12 20:56:31 +0000 |
| commit | 6e211182354fb4d6941e3a44ec1ec9d378b0e4ef (patch) | |
| tree | 60d9aaf382eefbb47cdbab9c74d98481cf0983de /gn3/settings.py | |
| parent | b815236123ff8e144bd84f349357a1852df95651 (diff) | |
| parent | 77c274b79c3ec01de60e90db3299763cb58f715b (diff) | |
| download | genenetwork3-6e211182354fb4d6941e3a44ec1ec9d378b0e4ef.tar.gz | |
Merge branch 'main' of https://github.com/genenetwork/genenetwork3 into bug/fix_rqtl_covariates
Diffstat (limited to 'gn3/settings.py')
| -rw-r--r-- | gn3/settings.py | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/gn3/settings.py b/gn3/settings.py index f4866d5..150d96d 100644 --- a/gn3/settings.py +++ b/gn3/settings.py @@ -24,3 +24,24 @@ GN2_BASE_URL = "http://www.genenetwork.org/" # biweight script BIWEIGHT_RSCRIPT = "~/genenetwork3/scripts/calculate_biweight.R" + +# wgcna script +WGCNA_RSCRIPT = "wgcna_analysis.R" +# qtlreaper command +REAPER_COMMAND = "{}/bin/qtlreaper".format(os.environ.get("GUIX_ENVIRONMENT")) + +# genotype files +GENOTYPE_FILES = os.environ.get( + "GENOTYPE_FILES", "{}/genotype_files/genotype".format(os.environ.get("HOME"))) + +# CROSS-ORIGIN SETUP +CORS_ORIGINS = [ + "http://localhost:*", + "http://127.0.0.1:*" +] + +CORS_HEADERS = [ + "Content-Type", + "Authorization", + "Access-Control-Allow-Credentials" +] |