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author | Alexander_Kabui | 2024-05-16 16:35:03 +0300 |
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committer | Alexander_Kabui | 2024-05-16 16:35:03 +0300 |
commit | fe23477126b482472f6193797f7d88f59421900c (patch) | |
tree | 04d71d9ef8c6f6055eaa675e55741ad1d9b70239 /gn3/llms | |
parent | f30300a82f605fa96130fbcbdcd17c53296d2372 (diff) | |
download | genenetwork3-fe23477126b482472f6193797f7d88f59421900c.tar.gz |
Init code refactoring for clients fahamu interface
Diffstat (limited to 'gn3/llms')
-rw-r--r-- | gn3/llms/client.py | 66 |
1 files changed, 11 insertions, 55 deletions
diff --git a/gn3/llms/client.py b/gn3/llms/client.py index b843907..14dcef3 100644 --- a/gn3/llms/client.py +++ b/gn3/llms/client.py @@ -1,20 +1,19 @@ +"""Module Contains code for making request to fahamu Api""" # pylint: skip-file import json import string -import os import time import requests - from requests import Session from requests.packages.urllib3.util.retry import Retry from requests.adapters import HTTPAdapter from urllib.parse import quote from gn3.llms.errors import LLMError -basedir = os.path.join(os.path.dirname(__file__)) - class TimeoutHTTPAdapter(HTTPAdapter): + """HTTP TimeoutAdapter """ + # todo rework on this def __init__(self, timeout, *args, **kwargs): """TimeoutHTTPAdapter constructor. Args: @@ -79,48 +78,29 @@ class GeneNetworkQAClient(Session): self.mount("https://", adapter) self.mount("http://", adapter) - @staticmethod - def format_bibliography_info(bib_info): - - if isinstance(bib_info, str): - # Remove '.txt' - bib_info = bib_info.removesuffix('.txt') - elif isinstance(bib_info, dict): - # Format string bibliography information - bib_info = "{0}.{1}.{2}.{3} ".format(bib_info.get('author', ''), - bib_info.get('title', ''), - bib_info.get('year', ''), - bib_info.get('doi', '')) - return bib_info - - @staticmethod def ask_the_documents(self, extend_url, my_auth): try: response = requests.post( self.base_url + extend_url, data={}, headers=my_auth) response.raise_for_status() except requests.exceptions.RequestException as e: - # Handle the exception appropriately, e.g., log the error raise RuntimeError(f"Error making the request: {e}") - if response.status_code != 200: return GeneNetworkQAClient.negative_status_msg(response), 0 - task_id = GeneNetworkQAClient.get_task_id_from_result(response) response = GeneNetworkQAClient.get_answer_using_task_id(task_id, my_auth) - if response.status_code != 200: - return GeneNetworkQAClient.negative_status_msg(response), 0 - return response, 1 @staticmethod def negative_status_msg(response): + """ handler for non 200 response from fahamu api""" return f"Error: Status code -{response.status_code}- Reason::{response.reason}" def ask(self, exUrl, *args, **kwargs): + """fahamu ask api interface""" askUrl = self.BASE_URL + exUrl res = self.custom_request('POST', askUrl, *args, **kwargs) if (res.status_code != 200): @@ -129,6 +109,7 @@ class GeneNetworkQAClient(Session): return res, task_id def get_answer(self, taskid, *args, **kwargs): + """Fahamu get answer interface""" query = self.answer_url + self.extendTaskID(taskid) res = self.custom_request('GET', query, *args, **kwargs) if (res.status_code != 200): @@ -136,15 +117,13 @@ class GeneNetworkQAClient(Session): return res, 1 def custom_request(self, method, url, *args, **kwargs): - + """ make custom request to fahamu api ask and get response""" max_retries = 50 retry_delay = 3 - for i in range(max_retries): try: response = super().request(method, url, *args, **kwargs) response.raise_for_status() - except requests.exceptions.HTTPError as error: if error.response.status_code == 500: raise LLMError(error.request, error.response, f"Response Error with:status_code:{error.response.status_code},Reason for error: Use of Invalid Fahamu Token") @@ -165,33 +144,23 @@ class GeneNetworkQAClient(Session): @staticmethod def get_task_id_from_result(response): + """method to get task_id from response""" task_id = json.loads(response.text) - result = f"?task_id={task_id.get('task_id', '')}" - return result + return f"?task_id={task_id.get('task_id', '')}" def get_answer_using_task_id(self, extend_url, my_auth): + """call this method with task id to fetch response""" try: response = requests.get( self.answer_url + extend_url, data={}, headers=my_auth) response.raise_for_status() return response except requests.exceptions.RequestException as error: - # Handle the exception appropriately, e.g., log the error raise error @staticmethod def filter_response_text(val): - """ - Filters out non-printable characters from - the input string and parses it as JSON. - - Args: - val (str): Input string to be filtered and parsed. - - Returns: - dict: Parsed JSON object. - # remove this - """ + """method to filter out non-printable chacracters""" return json.loads(''.join([str(char) for char in val if char in string.printable])) @@ -200,16 +169,3 @@ class GeneNetworkQAClient(Session): def extendTaskID(self, task_id): return '?task_id=' + str(task_id['task_id']) - - def get_gnqa(self, query): - qstr = quote(query) - res, task_id = GeneNetworkQAClient.ask('?ask=' + qstr) - res, success = GeneNetworkQAClient.get_answer(task_id) - - if success == 1: - resp_text = GeneNetworkQAClient.filter_response_text(res.text) - answer = resp_text.get('data', {}).get('answer', '') - context = resp_text.get('data', {}).get('context', '') - return answer, context - else: - return res, "Unfortunately, I have nothing." |