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| author | Muriithi Frederick Muriuki | 2021-08-17 08:44:20 +0300 |
|---|---|---|
| committer | Muriithi Frederick Muriuki | 2021-08-17 08:44:20 +0300 |
| commit | 5f56ac39c60b345e1a135c75f4bf35f8e881f4d6 (patch) | |
| tree | 483284d09b3a78084434e83ee3942d7fd492d1c3 /gn3/db | |
| parent | 89d4dbcc074765f07616fa5058ca7df1a5036d05 (diff) | |
| download | genenetwork3-5f56ac39c60b345e1a135c75f4bf35f8e881f4d6.tar.gz | |
Fix errors: add in missing parenthesis
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi
* Call the `cursor.fetchone()` function to get results. Without the
parenthesis, the code was trying to use the function itself as the results,
which was a bug, and would lead to failure.
Diffstat (limited to 'gn3/db')
| -rw-r--r-- | gn3/db/datasets.py | 8 |
1 files changed, 4 insertions, 4 deletions
diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py index 53d6811..4a05499 100644 --- a/gn3/db/datasets.py +++ b/gn3/db/datasets.py @@ -25,7 +25,7 @@ def retrieve_probeset_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname", "dataset_datascale"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_publish_trait_dataset_name( threshold: int, name: str, connection: Any): @@ -49,7 +49,7 @@ def retrieve_publish_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_geno_trait_dataset_name( threshold: int, name: str, connection: Any): @@ -73,7 +73,7 @@ def retrieve_geno_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_temp_trait_dataset_name( threshold: int, name: str, connection: Any): @@ -97,7 +97,7 @@ def retrieve_temp_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_dataset_name( trait_type: str, threshold: int, trait_name: str, dataset_name: str, |