From 5f56ac39c60b345e1a135c75f4bf35f8e881f4d6 Mon Sep 17 00:00:00 2001 From: Muriithi Frederick Muriuki Date: Tue, 17 Aug 2021 08:44:20 +0300 Subject: Fix errors: add in missing parenthesis Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/clustering.gmi * Call the `cursor.fetchone()` function to get results. Without the parenthesis, the code was trying to use the function itself as the results, which was a bug, and would lead to failure. --- gn3/db/datasets.py | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) (limited to 'gn3/db') diff --git a/gn3/db/datasets.py b/gn3/db/datasets.py index 53d6811..4a05499 100644 --- a/gn3/db/datasets.py +++ b/gn3/db/datasets.py @@ -25,7 +25,7 @@ def retrieve_probeset_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname", "dataset_datascale"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_publish_trait_dataset_name( threshold: int, name: str, connection: Any): @@ -49,7 +49,7 @@ def retrieve_publish_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_geno_trait_dataset_name( threshold: int, name: str, connection: Any): @@ -73,7 +73,7 @@ def retrieve_geno_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_temp_trait_dataset_name( threshold: int, name: str, connection: Any): @@ -97,7 +97,7 @@ def retrieve_temp_trait_dataset_name( return dict(zip( ["dataset_id", "dataset_name", "dataset_fullname", "dataset_shortname"], - cursor.fetchone)) + cursor.fetchone())) def retrieve_dataset_name( trait_type: str, threshold: int, trait_name: str, dataset_name: str, -- cgit v1.2.3