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| author | Frederick Muriuki Muriithi | 2023-07-10 11:36:47 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2023-07-10 11:36:47 +0300 |
| commit | c6ac30d4ccc26553a12e8c37cdf9078cbe9084b3 (patch) | |
| tree | a40cea1c2b129e0e37b70d42c6f87fe51a5ec178 /gn3/computations | |
| parent | edebea34ac6545909737ce9540e9d51858550873 (diff) | |
| download | genenetwork3-migrate-to-python3.10.tar.gz | |
Fix linting errors caused by bump to Python 3.10 migrate-to-python3.10
Diffstat (limited to 'gn3/computations')
| -rw-r--r-- | gn3/computations/partial_correlations.py | 7 |
1 files changed, 3 insertions, 4 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py index 9f02ad2..192ad7f 100644 --- a/gn3/computations/partial_correlations.py +++ b/gn3/computations/partial_correlations.py @@ -421,9 +421,8 @@ def literature_correlation_by_list( `web.webqtl.correlation.CorrelationPage.getLiteratureCorrelationByList` function in GeneNetwork1. """ - if any((lambda t: ( - bool(t.get("tissue_corr")) and - bool(t.get("tissue_p_value"))))(trait) + if any((bool(trait.get("tissue_corr")) and + bool(trait.get("tissue_p_value"))) for trait in trait_list): temporary_table_name = f"LITERATURE{random_string(8)}" query1 = ( @@ -491,7 +490,7 @@ def tissue_correlation_by_list( "tissue_p_value": result["p-val"] } - if any((lambda t: bool(t.get("l_corr")))(trait) for trait in trait_list): + if any(bool((trait)) for trait in trait_list): prim_trait_symbol_value_dict = fetch_gene_symbol_tissue_value_dict_for_trait( (primary_trait_symbol,), tissue_probeset_freeze_id, conn) if primary_trait_symbol.lower() in prim_trait_symbol_value_dict: |