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| author | Frederick Muriuki Muriithi | 2025-10-27 14:21:01 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2025-10-27 19:11:26 -0500 |
| commit | 51688d31004f8f7453d8190927b9c11503a453c0 (patch) | |
| tree | fe01bd42a5f8df1bdb9ece45f0c4c7b716c09eb2 /gn3/commands.py | |
| parent | 019282e64fb401f7a6823f3c8914d1d6e5ad0233 (diff) | |
| download | genenetwork3-51688d31004f8f7453d8190927b9c11503a453c0.tar.gz | |
Pass `TEXTDIR` configuration on to the script.
Pass the `TEXXDIR` configuration variable on to the script.
Diffstat (limited to 'gn3/commands.py')
| -rw-r--r-- | gn3/commands.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/gn3/commands.py b/gn3/commands.py index 3598e2f..697db42 100644 --- a/gn3/commands.py +++ b/gn3/commands.py @@ -77,7 +77,8 @@ def compose_pcorrs_command_for_database( criteria: int = 500) -> Tuple[str, ...]: """Build command for partial correlations against an entire dataset.""" return prefix_cmd + ( - "against-db", f"{target_database}", f"--criteria={criteria}") + "against-db", f"{target_database}", "--criteria", str(criteria), + "--textdir", current_app.config["TEXTDIR"]) def compose_pcorrs_command( |