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authorFrederick Muriuki Muriithi2023-10-12 02:22:23 +0300
committerFrederick Muriuki Muriithi2023-10-12 02:22:23 +0300
commit21b05916c762adaf27422d6a3ee1d6a8560cee2e (patch)
tree5fda730f7631a083331e34f851d193cf513d6a63 /gn3/case_attributes.py
parent3094afcbf3cc39e19498d8207401db6dafc2ecbd (diff)
downloadgenenetwork3-21b05916c762adaf27422d6a3ee1d6a8560cee2e.tar.gz
Remove unnecessary clutter.
Diffstat (limited to 'gn3/case_attributes.py')
-rw-r--r--gn3/case_attributes.py16
1 files changed, 0 insertions, 16 deletions
diff --git a/gn3/case_attributes.py b/gn3/case_attributes.py
index 9182237..8e8ea8a 100644
--- a/gn3/case_attributes.py
+++ b/gn3/case_attributes.py
@@ -23,8 +23,6 @@ from gn3.auth.authorisation.users import User
from gn3.auth.authorisation.errors import AuthorisationError
from gn3.auth.authorisation.oauth2.resource_server import require_oauth
-from gn3.debug import __pk__
-
caseattr = Blueprint("case-attribute", __name__)
CATTR_DIFFS_DIR = "case-attribute-diffs"
@@ -238,7 +236,6 @@ def __queue_diff__(conn: Connection, diff_data, diff_data_dir: Path) -> Path:
"""
diff = diff_data["diff"]
if bool(diff["Additions"]) or bool(diff["Modifications"]) or bool(diff["Deletions"]):
- __pk__(diff, "THE DIFF")
diff_data_dir.mkdir(parents=True, exist_ok=True)
created = datetime.now()
@@ -273,18 +270,6 @@ def __save_diff__(conn: Connection, diff_data: dict, status: EditStatus) -> int:
def __load_diff__(diff_filename):
"""Load the diff."""
- {
- "inbredset_id": inbredset_id,
- "user_id": str(user.user_id),
- "fieldnames": fieldnames,
- "diff": __compute_diff__(
- fieldnames,
- __process_orig_data__(
- fieldnames,
- __case_attribute_values_by_inbred_set__(conn, inbredset_id),
- __inbredset_strains__(conn, inbredset_id)),
- __process_edit_data__(fieldnames, request.json["edit-data"]))
- }
with open(diff_filename, encoding="utf8") as diff_file:
the_diff = json.loads(diff_file.read())
return {
@@ -345,7 +330,6 @@ def edit_case_attributes(inbredset_id: int) -> Response:
required_access(inbredset_id,
("system:inbredset:edit-case-attribute",))
user = the_token.user
- from gn3.auth.authorisation.users import DUMMY_USER; user=DUMMY_USER
fieldnames = (["Strain"] + sorted(
attr["Name"] for attr in
__case_attribute_labels_by_inbred_set__(conn, inbredset_id)))