Setup module for logging

During development, we need logging sometimes to help with troubleshooting
problems. This commit provides a module to help set up the logging in a
separate module from the app module.

1 files changed, 4 insertions, 0 deletions

diff --git a/gn3/app.py b/gn3/app.py
index 0c2f9f9..b4b4b43 100644
--- a/gn3/app.py
+++ b/gn3/app.py
@@ -7,6 +7,7 @@ from typing import Union
 from flask import Flask
 from flask_cors import CORS # type: ignore
 
+from gn3.loggers import setup_app_handlers
 from gn3.api.gemma import gemma
 from gn3.api.rqtl import rqtl
 from gn3.api.general import general
@@ -42,6 +43,9 @@ def create_app(config: Union[Dict, str, None] = None) -> Flask:
         elif config.endswith(".py"):
             app.config.from_pyfile(config)
 
+    # DO NOT log anything before this point
+    setup_app_handlers(app)
+
     CORS(
         app,
         origins=app.config["CORS_ORIGINS"],