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| author | Alexander_Kabui | 2025-02-25 13:25:21 +0300 |
|---|---|---|
| committer | Alexander_Kabui | 2025-02-25 13:25:21 +0300 |
| commit | d2314194549780997092d2688c47af5c63e06989 (patch) | |
| tree | f9646af687c6d564c77637c7f81acc6b72eed3ce | |
| parent | 3a651aad0b350b0e61f3e3d99613454b9b8e0a99 (diff) | |
| download | genenetwork3-d2314194549780997092d2688c47af5c63e06989.tar.gz | |
fix: handle extra columns in permutations CSV reader to prevent unpacking error.
| -rw-r--r-- | gn3/computations/rqtl2.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/computations/rqtl2.py b/gn3/computations/rqtl2.py index a06c929..b482c47 100644 --- a/gn3/computations/rqtl2.py +++ b/gn3/computations/rqtl2.py @@ -136,7 +136,7 @@ def process_permutation(data): with open(perm_file, "r", encoding="utf-8") as file_handler: reader = csv.reader(file_handler) phenotypes = next(reader)[1:] - perm_results = {_id:float(val) for (_id,val) in reader} + perm_results = {_id: float(val) for _id, val, *_ in reader} _, significance = fetch_significance_results(data.get("significance_file")) return { "phenotypes": phenotypes, |
