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authorMunyoki Kilyungi2023-10-24 16:35:39 +0300
committerBonfaceKilz2023-10-27 13:45:32 +0300
commitb155f08d4d2749297a12d1ba4b29786837c2cbb5 (patch)
tree387892b313e20c67e08571fb628acba7c873b1e5
parent1db5eb7f415bbeaea4c5d161fa885791c4a71eba (diff)
downloadgenenetwork3-b155f08d4d2749297a12d1ba4b29786837c2cbb5.tar.gz
Remove un-necessary prefixes when fetching a phenotype.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rw-r--r--gn3/api/metadata.py11
1 files changed, 10 insertions, 1 deletions
diff --git a/gn3/api/metadata.py b/gn3/api/metadata.py
index 00dea0a..fd4de69 100644
--- a/gn3/api/metadata.py
+++ b/gn3/api/metadata.py
@@ -411,6 +411,7 @@ CONSTRUCT {
except (RemoteDisconnected, URLError):
return jsonify({})
+
@metadata.route("/phenotypes/<name>", methods=["GET"])
def phenotypes(name):
"""Fetch a phenotype's metadata given it's name"""
@@ -457,10 +458,18 @@ CONSTRUCT {
if not results:
return jsonify({})
frame = {
- "@context": PREFIXES | {
+ "@context": {
"data": "@graph",
"type": "@type",
"id": "@id",
+ "skos": "http://www.w3.org/2004/02/skos/core#",
+ "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
+ "dct": "http://purl.org/dc/terms/",
+ "gnt": "http://genenetwork.org/term/",
+ "fabio": "http://purl.org/spar/fabio/",
+ "xsd": "http://www.w3.org/2001/XMLSchema#",
+ "prism": "http://prismstandard.org/namespaces/basic/2.0/",
+ "gnc": "http://genenetwork.org/category/",
"traitName": "skos:altLabel",
"trait": "rdfs:label",
"altName": "rdfs:altLabel",