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authorMunyoki Kilyungi2024-10-11 11:43:46 +0300
committerBonfaceKilz2024-10-14 23:50:49 +0300
commit8f462decf33af36311d0f15bf13860ab062b5e38 (patch)
tree34a6c7f48b1c787ff30fa322afc04cfed3879cf6
parentf9c4194d338422249e78b3fce30ac1c53ee8a953 (diff)
downloadgenenetwork3-8f462decf33af36311d0f15bf13860ab062b5e38.tar.gz
Replace species' shortName with it's full name in NCBI test data.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
-rw-r--r--tests/unit/db/rdf/data.py33
1 files changed, 16 insertions, 17 deletions
diff --git a/tests/unit/db/rdf/data.py b/tests/unit/db/rdf/data.py
index b5cd1dd..6bc612f 100644
--- a/tests/unit/db/rdf/data.py
+++ b/tests/unit/db/rdf/data.py
@@ -19,7 +19,7 @@ LPL_RIF_ENTRIES = {
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-02-23 20:40:00",
             "pubmed_id": 36763533,
@@ -30,7 +30,7 @@ leads to cleavage of the complex and restoration of LPL activity.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-04-07 20:39:00",
             "pubmed_id": 36652113,
@@ -41,7 +41,7 @@ Another negative notch for a beneficial enzyme?",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-04-27 20:33:00",
             "pubmed_id": 36519761,
@@ -52,7 +52,7 @@ SREBP2-lipoprotein lipase pathway-implications for Parkinson's disease.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-05-22 20:32:00",
             "pubmed_id": 36708756,
@@ -63,7 +63,7 @@ Future Major Adverse Cardiovascular Events in Patients Following Carotid Endarte
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-07-04 21:12:00",
             "pubmed_id": 37155355,
@@ -74,7 +74,7 @@ cardiovascular mortality: role of lipoprotein lipase activity modulation.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-07-13 20:35:00",
             "pubmed_id": 37432202,
@@ -83,10 +83,9 @@ Polymorphisms on Metabolic Syndrome in Middle-Aged Korean Adults.",
             "taxonomic_id": 9606,
         },
         {
-            "@id": "gn:rif-4023-37568214-2023-08-14T20:37:00-5",
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-08-14 20:37:00",
             "pubmed_id": 37568214,
@@ -98,7 +97,7 @@ variants reported to date.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-08-22 20:29:00",
             "pubmed_id": 37550668,
@@ -109,7 +108,7 @@ variant exerts a mild effect on protein function.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-09-12 20:35:00",
             "pubmed_id": 37128695,
@@ -121,7 +120,7 @@ A Pilot Study.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-09-25 09:33:00",
             "pubmed_id": 37427758,
@@ -133,7 +132,7 @@ with type 2 diabetes.",
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-11-01 08:55:00",
             "pubmed_id": 37901192,
@@ -144,7 +143,7 @@ Blood of Obese Children and Adolescents with Lipoprotein Lipase rs328 Gene Varia
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-11-10 08:44:00",
             "pubmed_id": 37871217,
@@ -155,7 +154,7 @@ capillaries by GPIHBP1 enters the glycocalyx where it mediates lipoprotein proce
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-12-28 20:33:00",
             "pubmed_id": 37858495,
@@ -166,7 +165,7 @@ evaluation of 19 Chinese pediatric patients with lipoprotein lipase deficiency."
         {
             "gene_id": 4023,
             "version": 5,
-            "species": "human",
+            "species": "Homo sapiens",
             "symbol": "LPL",
             "created": "2023-12-29 20:33:00",
             "pubmed_id": 38114521,
@@ -177,7 +176,7 @@ hypertriglyceridemia based on inhibiting lipoprotein lipase (LPL): a translation
         {
             "gene_id": 16956,
             "version": 5,
-            "species": "mouse",
+            "species": "Mus musculus",
             "symbol": "Lpl",
             "created": "2023-04-27 20:33:00",
             "pubmed_id": 36519761,
@@ -188,7 +187,7 @@ SREBP2-lipoprotein lipase pathway-implications for Parkinson's disease.",
         {
             "gene_id": 24539,
             "version": 5,
-            "species": "rat",
+            "species": "Rattus norvegicus",
             "symbol": "Lpl",
             "created": "2023-12-29 20:33:00",
             "pubmed_id": 38114521,