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| author | Alexander Kabui | 2021-05-30 13:26:15 +0300 |
|---|---|---|
| committer | zsloan | 2021-06-18 22:08:04 +0000 |
| commit | 07464f44f48895cc31ba2b088d6125e7777e1073 (patch) | |
| tree | 59b23a3aae7c955e558c160d1de07d79b8a86196 | |
| parent | 93ab68fe650eed0bb53d77225f47f72e527e48c4 (diff) | |
| download | genenetwork3-07464f44f48895cc31ba2b088d6125e7777e1073.tar.gz | |
fix index error (#16)
| -rw-r--r-- | gn3/computations/correlations.py | 2 | ||||
| -rw-r--r-- | tests/unit/computations/test_correlation.py | 2 |
2 files changed, 2 insertions, 2 deletions
diff --git a/gn3/computations/correlations.py b/gn3/computations/correlations.py index 25dd26d..f0ce502 100644 --- a/gn3/computations/correlations.py +++ b/gn3/computations/correlations.py @@ -247,7 +247,7 @@ def fetch_lit_correlation_data( cursor.execute(query_formatter(query, *tuple(reversed(query_values)))) lit_corr_results = cursor.fetchone() - lit_results = (gene_id, lit_corr_results[1])\ + lit_results = (gene_id, lit_corr_results[0])\ if lit_corr_results else (gene_id, 0) return lit_results return (gene_id, 0) diff --git a/tests/unit/computations/test_correlation.py b/tests/unit/computations/test_correlation.py index d264738..5746adf 100644 --- a/tests/unit/computations/test_correlation.py +++ b/tests/unit/computations/test_correlation.py @@ -276,7 +276,7 @@ class TestCorrelation(TestCase): input trait mouse gene id and mouse gene id """ - expected_db_results = [("val", x*0.1) + expected_db_results = [[x*0.1] for x in range(1, 4)] conn = DataBase(expected_results=expected_db_results) expected_results = ("1", 0.1) |