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| author | Frederick Muriuki Muriithi | 2021-12-20 09:38:17 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2021-12-24 14:36:14 +0300 |
| commit | 0508fc422c033cfff8bbea118f85282212d236e4 (patch) | |
| tree | 6be272a2a644cc216bc47952b09504e3249a5a52 | |
| parent | ac8528c5847f4a517c16b5283c06d3caeae8ef5e (diff) | |
| download | genenetwork3-0508fc422c033cfff8bbea118f85282212d236e4.tar.gz | |
Return the correlation method used
Issue:
https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi
* Return the correlation method used
| -rw-r--r-- | gn3/computations/partial_correlations.py | 3 |
1 files changed, 2 insertions, 1 deletions
diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py index 9fb17f7..dbcbe29 100644 --- a/gn3/computations/partial_correlations.py +++ b/gn3/computations/partial_correlations.py @@ -770,5 +770,6 @@ def partial_correlations_entry(# pylint: disable=[R0913, R0914, R0911] trait_for_output(trait) for trait in cntrl_traits), "correlations": tuple( trait_for_output(trait) for trait in trait_list), - "dataset_type": target_dataset["type"] + "dataset_type": target_dataset["type"], + "method": "spearman" if "spearman" in method.lower() else "pearson" }} |