From 0508fc422c033cfff8bbea118f85282212d236e4 Mon Sep 17 00:00:00 2001 From: Frederick Muriuki Muriithi Date: Mon, 20 Dec 2021 09:38:17 +0300 Subject: Return the correlation method used Issue: https://github.com/genenetwork/gn-gemtext-threads/blob/main/topics/gn1-migration-to-gn2/partial-correlations.gmi * Return the correlation method used --- gn3/computations/partial_correlations.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/gn3/computations/partial_correlations.py b/gn3/computations/partial_correlations.py index 9fb17f7..dbcbe29 100644 --- a/gn3/computations/partial_correlations.py +++ b/gn3/computations/partial_correlations.py @@ -770,5 +770,6 @@ def partial_correlations_entry(# pylint: disable=[R0913, R0914, R0911] trait_for_output(trait) for trait in cntrl_traits), "correlations": tuple( trait_for_output(trait) for trait in trait_list), - "dataset_type": target_dataset["type"] + "dataset_type": target_dataset["type"], + "method": "spearman" if "spearman" in method.lower() else "pearson" }} -- cgit v1.2.3