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| author | Alexander_Kabui | 2022-07-21 23:28:46 +0300 |
|---|---|---|
| committer | BonfaceKilz | 2022-07-22 14:52:08 +0300 |
| commit | 8a989237b0099467bab9875e250f07085ba48a07 (patch) | |
| tree | 370cbaf5f296591c8d015e4056c8186a11e9ed4a | |
| parent | d4d1a39c4aa302ee2a074da6fdf76a6fab91c267 (diff) | |
| download | genenetwork3-8a989237b0099467bab9875e250f07085ba48a07.tar.gz | |
import rust_correlation when running gn3 as lib
| -rw-r--r-- | gn3/settings.py | 2 |
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/settings.py b/gn3/settings.py index 35f6f05..5bb5f17 100644 --- a/gn3/settings.py +++ b/gn3/settings.py @@ -31,7 +31,7 @@ REAPER_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/qtlreaper" # correlation command -CORRELATION_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/correlation_rust" +CORRELATION_COMMAND = f"{os.environ.get('GN2_PROFILE')}/bin/correlation_rust" # genotype files GENOTYPE_FILES = os.environ.get( |