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authorAlexander_Kabui2022-07-21 23:28:46 +0300
committerBonfaceKilz2022-07-22 14:52:08 +0300
commit8a989237b0099467bab9875e250f07085ba48a07 (patch)
tree370cbaf5f296591c8d015e4056c8186a11e9ed4a
parentd4d1a39c4aa302ee2a074da6fdf76a6fab91c267 (diff)
downloadgenenetwork3-8a989237b0099467bab9875e250f07085ba48a07.tar.gz
import rust_correlation when running gn3 as lib
-rw-r--r--gn3/settings.py2
1 files changed, 1 insertions, 1 deletions
diff --git a/gn3/settings.py b/gn3/settings.py
index 35f6f05..5bb5f17 100644
--- a/gn3/settings.py
+++ b/gn3/settings.py
@@ -31,7 +31,7 @@ REAPER_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/qtlreaper"
# correlation command
-CORRELATION_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/correlation_rust"
+CORRELATION_COMMAND = f"{os.environ.get('GN2_PROFILE')}/bin/correlation_rust"
# genotype files
GENOTYPE_FILES = os.environ.get(