From 8a989237b0099467bab9875e250f07085ba48a07 Mon Sep 17 00:00:00 2001 From: Alexander_Kabui Date: Thu, 21 Jul 2022 23:28:46 +0300 Subject: import rust_correlation when running gn3 as lib --- gn3/settings.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/gn3/settings.py b/gn3/settings.py index 35f6f05..5bb5f17 100644 --- a/gn3/settings.py +++ b/gn3/settings.py @@ -31,7 +31,7 @@ REAPER_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/qtlreaper" # correlation command -CORRELATION_COMMAND = f"{os.environ.get('GUIX_ENVIRONMENT')}/bin/correlation_rust" +CORRELATION_COMMAND = f"{os.environ.get('GN2_PROFILE')}/bin/correlation_rust" # genotype files GENOTYPE_FILES = os.environ.get( -- cgit v1.2.3