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console.log("before get_traits_from_collection")
# Going to be used to hold collection list
# So we can repopulate it when the back button is clicked
collection_list = null
this_trait_data = null
selected_traits = {}
collection_click = () ->
console.log("Clicking on:", $(this))
this_collection_url = $(this).find('.collection_name').prop("href")
this_collection_url += "&json"
console.log("this_collection_url", this_collection_url)
collection_list = $("#collections_holder").html()
$.ajax(
dataType: "json",
url: this_collection_url,
success: process_traits
)
submit_click = () ->
selected_traits = {}
traits = []
$('#collections_holder').find('input[type=checkbox]:checked').each ->
this_trait = $(@).parents('tr').find('.trait').text()
console.log("this_trait is:", this_trait)
this_dataset = $(@).parents('tr').find('.dataset').text()
console.log("this_dataset is:", this_dataset)
this_trait_url = "/trait/get_sample_data?trait="+this_trait+"&dataset="+this_dataset
$.ajax(
dataType: "json",
url: this_trait_url,
async: false,
success: add_trait_data
)
console.log("SELECTED_TRAITS IS:", selected_traits)
trait_names = []
samples = $('input[name=allsamples]').val().split(" ")
all_vals = []
this_trait_vals = get_this_trait_vals(samples)
all_vals.push(this_trait_vals)
for trait in Object.keys(selected_traits)
trait_names.push(trait)
this_trait_vals = []
for sample in samples
if sample in Object.keys(selected_traits[trait])
this_trait_vals.push(parseFloat(selected_traits[trait][sample]))
else
this_trait_vals.push(null)
all_vals.push(this_trait_vals)
create_scatterplots(trait_names, samples, all_vals)
$.colorbox.close()
trait_click = () ->
console.log("Clicking on:", $(this))
trait = $(this).parent().find('.trait').text()
dataset = $(this).parent().find('.dataset').text()
this_trait_url = "/trait/get_sample_data?trait="+trait+"&dataset="+dataset
console.log("this_trait_url", this_trait_url)
$.ajax(
dataType: "json",
url: this_trait_url,
success: get_trait_data
)
$.colorbox.close()
add_trait_data = (trait_data, textStatus, jqXHR) ->
trait_name = trait_data[0]
trait_sample_data = trait_data[1]
selected_traits[trait_name] = trait_sample_data
console.log("selected_traits:", selected_traits)
get_trait_data = (trait_data, textStatus, jqXHR) ->
#trait_list = $('input[name=compare_traits]')
#console.log("trait_list:", trait_list.val())
console.log("trait:", trait_data[0])
trait_sample_data = trait_data[1]
console.log("trait_sample_data:", trait_sample_data)
samples = $('input[name=allsamples]').val().split(" ")
vals = []
for sample in samples
if sample in Object.keys(trait_sample_data)
vals.push(parseFloat(trait_sample_data[sample]))
else
vals.push(null)
#console.log("sorted_samples:", samples)
#console.log("sorted_vals:", vals)
if $('input[name=samples]').length < 1
$('#hidden_inputs').append('<input type="hidden" name="samples" value="[' + samples.toString() + ']" />')
$('#hidden_inputs').append('<input type="hidden" name="vals" value="[' + vals.toString() + ']" />')
this_trait_vals = get_this_trait_vals(samples)
#json_data = assemble_into_json(this_trait_vals_json)
#console.log("json_data[1]:", json_data[1])
console.log("THE LENGTH IS:", $('input[name=vals]').length)
#if $('input[name=vals]').length == 1
# create_scatterplot(samples, [this_trait_vals, vals])
color_by_trait(trait_sample_data)
get_this_trait_vals = (samples) ->
this_trait_vals = []
for sample in samples
this_val = parseFloat($("input[name='value:"+sample+"']").val())
if !isNaN(this_val)
this_trait_vals.push(this_val)
else
this_trait_vals.push(null)
console.log("this_trait_vals:", this_trait_vals)
this_vals_json = '[' + this_trait_vals.toString() + ']'
return this_trait_vals
assemble_into_json = (this_trait_vals) ->
num_traits = $('input[name=vals]').length
samples = $('input[name=samples]').val()
json_ids = samples
json_data = '[' + this_trait_vals
$('input[name=vals]').each (index, element) =>
json_data += ',' + $(element).val()
json_data += ']'
return [json_ids, json_data]
color_by_trait = (trait_sample_data, textStatus, jqXHR) ->
#trait_sample_data = trait_sample_data
console.log('in color_by_trait:', trait_sample_data)
root.bar_chart.color_by_trait(trait_sample_data)
process_traits = (trait_data, textStatus, jqXHR) ->
console.log('in process_traits with trait_data:', trait_data)
the_html = "<button id='back_to_collections' class='btn btn-inverse btn-small'>"
the_html += "<i class='icon-white icon-arrow-left'></i> Back </button>"
the_html += " <button id='submit' class='btn btn-primary btn-small'> Submit </button>"
the_html += "<table class='table table-hover'>"
the_html += "<thead><tr><th></th><th>Record</th><th>Data Set</th><th>Description</th><th>Mean</th></tr></thead>"
the_html += "<tbody>"
for trait in trait_data
the_html += "<tr class='trait_line'>"
the_html += "<td class='select_trait'><input type='checkbox' name='selectCheck' class='checkbox edit_sample_checkbox'></td>"
the_html += "<td class='trait'>#{ trait.name }</td>"
the_html += "<td class='dataset'>#{ trait.dataset }</td>"
the_html += "<td>#{ trait.description }</td>"
the_html += "<td>#{ trait.mean or ' ' }</td></tr>"
the_html += "</tbody>"
the_html += "</table>"
$("#collections_holder").html(the_html)
$('#collections_holder').colorbox.resize()
back_to_collections = () ->
console.log("collection_list:", collection_list)
$("#collections_holder").html(collection_list)
$(document).on("click", ".collection_line", collection_click)
$('#collections_holder').colorbox.resize()
$ ->
console.log("inside get_traits_from_collection")
$(document).on("click", ".collection_line", collection_click)
$(document).on("click", "#submit", submit_click)
$(document).on("click", ".trait", trait_click)
$(document).on("click", "#back_to_collections", back_to_collections)
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