web/tutorial/ppt/html/webqtl_demo2.ppt_files/slide0052.htm


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<title>PowerPoint Presentation  -  Complex trait analysis, develop-ment, and
genomics</title>
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<meta name=Description content="Jul-18-05: Discovering upstream modulatory loci">
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mso-text-raise:0%;mso-line-spacing:"-358 0 -1";mso-line-spacing:"-358 0 -1"'><span
style='font-family:Verdana;font-size:64%'>Discovering upstream modulatory loci</span><span
style='font-family:Verdana;font-size:73%;mso-special-format:lastCR;display:
none'><i><br>
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  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><font face=Verdana size=3>Please bring the Trait
   Data and Analysis window to the front and look for the Interval Mapping
   button. Confirm that you are back to the trait amyloid beta precursor
   protein.<span style="mso-spacerun: yes">&nbsp; </span>If so, then just click
   the button.</font><br>
   </td>
  </tr>
  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><br>
   </td>
  </tr>
  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><font face=Verdana size=3>Notice that the default
   for:</font><br>
   </td>
  </tr>
  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><font face=Verdana size=3>Select Chrs (chromosomes)
   is ALL</font><br>
   </td>
  </tr>
  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><font face=Verdana size=3>Select Mapping Scale is
   set to GENETIC</font><br>
   </td>
  </tr>
  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><font face=Verdana size=3>Options: Permutation test
   YES<span style="mso-spacerun: yes">&nbsp; </span>(2000 is the default
   number)</font><br>
   </td>
  </tr>
  <tr>
   <td colspan=1></td>
   <td align=left colspan=1><font face=Verdana size=3>Options: Bootstrap test
   YES (2000 is the default number)</font><br>
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